Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1083 ATGGCGACTATGACGAGTTTGATCGGTCTCATCAACAAGATCCAACGTGCATGCACTGTCTTAGGTGACCATGGCGGTGGTGGTTTGTCACTCTGGGAGGCTCTTCCCTCCGTCGCCGTCGTTGGAGGACAGAGTTCAGGGAAATCGTCGGTGTTAGAGAGTGTGGTTGGAAGGGATTTTCTGCCTCGTGGATCTGGTATTGTTACACGAAGGCCGCTAGTGTTGCAACTTCACAAGACAGAAGATGGACAACAGGATTATGCCGAGTTTCTTCATGCCCCTAGAAAGAGATTCACTGACTTCGTTGCTGTAAGGCAGGAAATTGCAGACGAAACAGATCGTATAACTGGGAAGTCGAAGCAAATTTCAAACATTCCAATTCAACTCAGCATACATTCTCCAAATGTTGTAAACTTAACCCTCATAGATCTTCCTGGATTGACAAAGGTTGCCGTAGAGGGACAATCAGAAAGTATTGTTCAAGATATTGAACACATGGTCCGATCCTATGTTGAGAAGCCCAACTGCATTATATTGGCCATCTCTCCTGCAAACCAAGATATTGCCACTTCAGATGCAATAAAAATTGCAAAAGAAGTTGATCCTTCGGGTGAAAGAACATTTGGAGTGGTGACAAAACTTGATCTTATGGATAAAGGAACAAATGCCGTTGATGTTCTGGAAGGAAGACATTACAGGTTGCAGCATCCATGGGTTGGAATTGTTAACCGTTCACAAGCGGATATTAATAAAAATGTTGACATGATTCTTGCCCGCAAGAAGGAGCGTGAGTATTTTGAGACGAGCCCTGAATATGGACATTTGGCACATAAAATGGGTGCAGAATACCTTGCCAAACTTCTATCTGAGCATCTGGAGATTGTCATTAGGCAGCGGATTCCTAGTATCATTGCCTTAATAAATAAAACCATTGACGAGCTTAATGCAGAATTGGACCGCATTGGCAGGCCTATAGCTGTGGATTCAGGGGCCCAACTATACACTATTTTAGAGATGTGTCGAGCATTCGACAAAGTATTTAAGGAACACATCGATGGAGGACGTCCAGGTGGGGACAAAATTTATGGGGTTTTTGACAACCAATTACCGGCTGCTTTGAAAAAGCTCCCCTTTGATCGTCATCTTTCACTAAAAAATGTACAGCGAGTTGTTACTGAAGCCGATGGTTATCAGCCCCATCTGATTGCTCCAGAGCAAGGGTACAGAAGACTTATTGAAGGTTGTTTAGGCTACTTCAAAGGCCCAGCTGATGCCTCTGTGGACGCTGTCCATCTTGTTTTAAAAGAACTTGTACGGAAGGCAATTGCAGCAACTGAGGAATTGAAGAGGTTTCCAACACTTAAAAATGAAATAGCCACAGCTGCAAATGATTCTTTGGATAGATTCCGAGAAGAAAGTAGAAAGACAGTGACCCGGCTAGTTGATATGGAGTCTAGCTATCTAACAGTAGAATTTTTTCGAAAGATTAATCTTGAATCAGAAACAAACCCAGGCCGGAATACCCCTAATAATCCTAATCCTAATCTGGACAGTTACTCGGATAATCACCTCAGGAAAATTGGATCAAATGTTAATGCCTATATCAACATGATATGTGACACACTTAAAAATTCTATACCAAAGGCTGTGGTCTATTGTCAAGTTAGAGAAGCAAAGAGATCATTGCTTAACCGCTTTTATGTTCAAGTTGGAAAAAAAGAGAAGGAGCAACTCGGGACCATGTTGGATGAAGATCCCGCACTTATGGAAAAGAGAACACAATTAGCTAAAAGGCTTGAATTGTACAAGCAAGCTAGGGATGACATTGATTCAGTGGCTTGGAAATAA 1848 0.4237 MATMTSLIGLINKIQRACTVLGDHGGGGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGQQDYAEFLHAPRKRFTDFVAVRQEIADETDRITGKSKQISNIPIQLSIHSPNVVNLTLIDLPGLTKVAVEGQSESIVQDIEHMVRSYVEKPNCIILAISPANQDIATSDAIKIAKEVDPSGERTFGVVTKLDLMDKGTNAVDVLEGRHYRLQHPWVGIVNRSQADINKNVDMILARKKEREYFETSPEYGHLAHKMGAEYLAKLLSEHLEIVIRQRIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHIDGGRPGGDKIYGVFDNQLPAALKKLPFDRHLSLKNVQRVVTEADGYQPHLIAPEQGYRRLIEGCLGYFKGPADASVDAVHLVLKELVRKAIAATEELKRFPTLKNEIATAANDSLDRFREESRKTVTRLVDMESSYLTVEFFRKINLESETNPGRNTPNNPNPNLDSYSDNHLRKIGSNVNAYINMICDTLKNSIPKAVVYCQVREAKRSLLNRFYVQVGKKEKEQLGTMLDEDPALMEKRTQLAKRLELYKQARDDIDSVAWK* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1083 615 Gene3D Dynamin, middle domain 327 578 - -
Psa6g1083 615 Gene3D - 4 310 IPR027417 -
Psa6g1083 615 ProSiteProfiles GED domain profile. 524 615 IPR020850 -
Psa6g1083 615 Pfam Dynamin family 38 213 IPR045063 -
Psa6g1083 615 PRINTS Dynamin signature 35 53 IPR022812 -
Psa6g1083 615 PRINTS Dynamin signature 60 77 IPR022812 -
Psa6g1083 615 PRINTS Dynamin signature 133 150 IPR022812 -
Psa6g1083 615 PRINTS Dynamin signature 183 201 IPR022812 -
Psa6g1083 615 PRINTS Dynamin signature 202 218 IPR022812 -
Psa6g1083 615 PRINTS Dynamin signature 225 244 IPR022812 -
Psa6g1083 615 PANTHER BNAA09G45430D PROTEIN 4 615 - -
Psa6g1083 615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 309 IPR027417 -
Psa6g1083 615 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Psa6g1083 615 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Psa6g1083 615 SMART GED_2 519 612 IPR003130 GO:0003924|GO:0005525
Psa6g1083 615 Pfam Dynamin GTPase effector domain 520 612 IPR003130 GO:0003924|GO:0005525
Psa6g1083 615 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Psa6g1083 615 Pfam Dynamin central region 222 489 IPR000375 -
Psa6g1083 615 PANTHER DYNAMIN 4 615 IPR022812 -
Psa6g1083 615 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1083 Psa-Chr6 41827519 41836582 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1083 6 41827519 41836582 Psa6g1083 6 41827519 41836582 ECH