Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1080 ATGGAGGAAATTTTCGGCGACGGAGGAGGAGTTGCGACACCGGTGCCGCTTTCGGTGTCGGGATCGTTTAGAGAAGGGAGAGGCTCGTCGAGGAGACGCGGCTCCGCTAGACAGCCGAGCATGGAGGCGGATGAGTTCATGAATTTGTTGCACGGTTCGGATCCGGTGAAGGTGGAACTTAATCGTCTTGAGAATGAAGTTCGAGATAAGGATAGAGAATTATCAGAAGCACAAGCTGAGATTAAAGCGTTGAGGCATTCTGAACGACTTAGAGAAAAGGCAGTTGAAGAGCTGTCTGAAGAGCTGTCAAAGGTTGATGGGAAGCTAAAGTTATCAGAATCTCTATTAGAAAGCAGAAAAGCATCAATGGCAGCTCAGTTTGCAGCAGAAGCTACTCTTCGAAGGGTTCATGCTGCTCAAAAGGATGATGACATGCCTCCGATAGAAGCGATTCTTGCCCCTTTGGAGGCTGAACTAAAGCTTGCTCGGCAAGAGATTGCTAAACTACAAGATGACAACAGAGCTTTAGACCGTCTTACCAAATCCAAAGAAGCTGCACTACTTGAAGCTGAAAGGACTGTTCAGTTTGCCTTGGCTAAGGCCTCCATGGTGGATGATCTCCAAAACAAAAATCAAGAGCTGATGAAACAGATTGAGATTTGCCAGGAAGAAAACAAAATTTTGGACAGAATGCATAGACAAAAGGTGGCCGAGGTTGAAAAGCTCACCCAAACTGTGAGGGAACTAGAAGAGTCGGTCCTTGCCGGTGGTGCAGCAGCAAATGCAGTGAGAGATTATCAACGGAAAGTTCAAGAAATGAATGAAGAAAGAAAAACCCTTAATAGGGAATTAGGCCGTGCCAAGGTAACAGCAAACAGAGTAGCTGTTGTGGTTGCAAATGAATGGAAAGATGCTAATGATAAAGGGGAAATGCAGCAACTCCGTGATAAGCTTGCTATAGCTGAGCGCACTTCAAAATCTGAAGCACAGTTGAAAGAAAAATATCAATTACGGCTGAAAGTGCTAGAGGAGAGTTTGAGGGGCAATTCTAGCGGCAGTAGTCGCAGCACTATAGAGGGAAGAAGTATGAACAATGGTTATTCTCGTCGCCAATCACTAGGTGGAGCTGATAATATCTCAAAACTAACCTCTAACGGATTCTTGCCTAAGAGAGCACCATCTCCTCAACTCAGGTCATCATCTGTATCATCTAGCTCAATATTGAGGCATGCTAAAGGAACATCTAAATCTTTTGATGGTGGCTCAAGGACACTGGACAGGAGTAAGACGTTGCTGAGTGGAGCACCTCAAAGTTACTCATTCAACCAATCTCTTGAAGAAACCAAAGAGAGAGAGGCTGATGATAATTGGAAAGGAAGTTCGGGTGATAAGCCAAATGACTTCCCACCAGGGGATACAGATGATAGTATTCCAAGTGTTTTATATGACCTCTTGCAGAAAGAAGTTATTGCCTTGAGGAGAGCTGGTCATGAGAAAGACCAAAGCCTAAAAGATAAAGATGATGCCATTGAGATGTTAGCAAAGAAAGTAGATACATTGACCAAAGCTATGGAAGTTGAAGCAAAGAAGATGAGAAGGGAAGTAGCTGCCATGGAAAAGGAGGTAGCTGCTATGCGTGTCGAGAAAGTACAAGAGAACAGAGCAAAACGGTTCAGCAATATAAAGGGTCCTGTAAACAGTGCTCAAAATCAGCTAATTTCTGGAAGAAATGTGACACGGGGAGGATTAACACGCAGCACCCAATAA 1767 0.4437 MEEIFGDGGGVATPVPLSVSGSFREGRGSSRRRGSARQPSMEADEFMNLLHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRHSERLREKAVEELSEELSKVDGKLKLSESLLESRKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNRALDRLTKSKEAALLEAERTVQFALAKASMVDDLQNKNQELMKQIEICQEENKILDRMHRQKVAEVEKLTQTVRELEESVLAGGAAANAVRDYQRKVQEMNEERKTLNRELGRAKVTANRVAVVVANEWKDANDKGEMQQLRDKLAIAERTSKSEAQLKEKYQLRLKVLEESLRGNSSGSSRSTIEGRSMNNGYSRRQSLGGADNISKLTSNGFLPKRAPSPQLRSSSVSSSSILRHAKGTSKSFDGGSRTLDRSKTLLSGAPQSYSFNQSLEETKEREADDNWKGSSGDKPNDFPPGDTDDSIPSVLYDLLQKEVIALRRAGHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRVEKVQENRAKRFSNIKGPVNSAQNQLISGRNVTRGGLTRSTQ* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1080 588 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 3 588 IPR009768 GO:0007010|GO:0008017
Psa6g1080 588 Coils Coil 60 87 - -
Psa6g1080 588 MobiDBLite consensus disorder prediction 558 588 - -
Psa6g1080 588 MobiDBLite consensus disorder prediction 346 444 - -
Psa6g1080 588 MobiDBLite consensus disorder prediction 1 42 - -
Psa6g1080 588 MobiDBLite consensus disorder prediction 445 461 - -
Psa6g1080 588 Coils Coil 204 252 - -
Psa6g1080 588 MobiDBLite consensus disorder prediction 560 588 - -
Psa6g1080 588 Coils Coil 521 548 - -
Psa6g1080 588 MobiDBLite consensus disorder prediction 346 472 - -
Psa6g1080 588 Coils Coil 263 290 - -
Psa6g1080 588 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1 3 588 - -
Psa6g1080 588 Coils Coil 152 179 - -
Psa6g1080 588 Pfam Microtubule-associated protein 70 44 569 IPR009768 GO:0007010|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1080 Psa-Chr6 41724982 41732168 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1080 6 41724982 41732168 Psa6g1080 6 41724982 41732168 ECH