Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1074 ATGTGGAGCGGAAGGGAATCTCTTTGCATTCCGGAAAGGTTTCGACGGTCAGATTGTGTCCTGGATTCGCAGGTCAAGGAAGATGGTTTGAGAATTCGGACTGTGGAGCATTTGCTTTCTGCGTTGGAAGCTGCTGGTGTTGATAATTGTAGGATCGAGATTGAGAATTTGGATGATCAAGATAATGAGGCCGAGATTCCTATATTTGATGGGTCGGCAAGGGAATGGGTGGAAGCCTTGGACGAAGTTGGTTTAGAGACAGCAACTGATATTGATGGAAAAAGCTGTGAGAAAATTGCTCCACATGTGAATGAACCAGTGCATGTTTGGAGGAATGATTCTTTTATTGCTGCATTTCCCTCAGAAGTGGTTCGAGTAACTTATGGCATAAACTTTTCACAGGCACCTGCTATTGGCTGCCAATGGTTTTCTACACCCCCCTTGGATGATTTGGTTTATTCCATGCAAATAGCATCATCAAGAACCTTCTGCATCTATGAGGAGGTTGAGCAAATGCGCAGTGCTGGACTTATCAAAGGGGGTTCTCTAGAAAATGCCATTGTGTGCAGTATTAGTAAAGGTTGGTTGAATCCACCTCTTCGTTTCAGTGATGAACCATGTCGTCACAAGATTTTAGATCTAATTGGCGATCTCTCACTCCTAGCTCAGTTTGGTAATCAAGGACTCCCTGTGGCACACATAGTAGCTTACAAGGGTGGCCATGCATTGCATGTTGATTTGACTCGCCAACTGATGGGAATGACCTAA 768 0.444 MWSGRESLCIPERFRRSDCVLDSQVKEDGLRIRTVEHLLSALEAAGVDNCRIEIENLDDQDNEAEIPIFDGSAREWVEALDEVGLETATDIDGKSCEKIAPHVNEPVHVWRNDSFIAAFPSEVVRVTYGINFSQAPAIGCQWFSTPPLDDLVYSMQIASSRTFCIYEEVEQMRSAGLIKGGSLENAIVCSISKGWLNPPLRFSDEPCRHKILDLIGDLSLLAQFGNQGLPVAHIVAYKGGHALHVDLTRQLMGMT* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1074 255 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 21 252 IPR004463 GO:0008759|GO:0009245
Psa6g1074 255 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 23 253 IPR004463 GO:0008759|GO:0009245
Psa6g1074 255 SUPERFAMILY Ribosomal protein S5 domain 2-like 105 252 IPR020568 -
Psa6g1074 255 Gene3D lpxc deacetylase, domain 1 10 91 IPR015870 GO:0008759|GO:0009245
Psa6g1074 255 SUPERFAMILY Ribosomal protein S5 domain 2-like 18 87 IPR020568 -
Psa6g1074 255 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 18 251 IPR004463 GO:0008759|GO:0009245
Psa6g1074 255 Gene3D lpxc deacetylase, domain 2 102 255 IPR011334 GO:0008759|GO:0009245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1074 27 251 Carbohydrate Esterase AT1G25054 67.111 6.96e-112 323
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1074 6 41491841 41497288 Psa6g1074 6 41491841 41497288 ECH