Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1072 ATGGCGGAAGCTCTCTCGGTGATGCCGGCTGCCGTGCTCCGTAACCTCGCCGACAAACTCTATGAGAAACGCAAGAACGCCGCTCTCGAGGTTGAGGGGATTGTGAAGCAGCTTGCTTCTGCTGGTGATCATGATAAGATAACCTCTGTGATTACTTTGTTGACTACGGAATTTACATATTCACCCCAAGCAAATCATCGCAAGGGAGGGTTGATAAGCTTAGCTGCCGCTACGGTTGGGTTGACTAATGAAGCTGCTCAGCATCTTGAGCAAATTGTGCCTCCTGTGTTAAATTCTTTCTCGGATCAAGATAGCAGAGTTCGATATTATGCCTGTGAGGCACTATATAACATTGCCAAGGTTGTGAGGGGAGATTTTATTGTATTCTTCAACCAGATCTTTGATGCCTTGTGCAAGCTTTCTGCAGATTCAGATGCCAATGTACAAAGTGCTGCACATCTCTTGGATCGACTCGTAAAGGATATTGTGACCGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCATTATTGAGGGAGCGCATGAATGTACTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTAGACAGTGTACCAGATATTGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGTTTGTTTAATATGTTGAGCGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATAAAGAACTCTCCATCTGTAGATTATGGCCGAATGGCTGAAATACTGGTACAAAGAGCTGGTTCTCCAGATGAATTTACTAGGTTAACGGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTACCTTGCATATCCGATAAAGAAGAGAAAATTAGAGTGGTTGCCCGGGAAACCAATGAAGAGCTACGAGCAATCAATGCTAATCCAGCTGAAGCATTTGATGTAGGAGCAATCCTCTCCATTGCAAGGAGGCAACTATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATAGCAATCCTCCTAAACAGACATCGTATTGAGGTTTTGATATACCTGAACGACATATTTGACACCCTTCTCAAAGCACTTTCAGATCCATCTGATGAGGTTGTTCTTTTAGTTCTTGATGTTCATGCATGCATTGCAAAAGACTCTCAGCACTTTCGACATCTTGTCGTTTTCCTTGTGCACAGTTTCAGGCTAGATCATTCTCTTTTGGAAAAGCGTGGTGCTTTGATAATTCGCCGCCTTTGTGTGCTTTTGAATGCTGAGAGAGTCTACCGTGAACTTTCTACGATATTAGAAGGAGAATCAGATTTGGATTTTGCATCAATTATGATTCAGGCATTGAATTTGATCTTACTTACATCATCAGAATTGTCTGAGATTCGAGATCTTTTGAAGCAATCACTGGTAAATCCTGCTGGGAAGGACTTGTATGTTTCTTTGTATGCCTCTTGGTGTCATTCTCCAATGGCAATTATAAGTCTCTGCTTCTTAGCTCAGACTTACCGACATGCAAGTACTGTGATTCAATCTCTGATAGAGGAGGATATAAATGTCAAGTTTTTGGTCCAACTGGATAAATTGATTCGCCTGCTGGAAACTCCAATCTTCGCTTATCTTAGATTGCAGCTTCTCGATCCTGGAAGATATTTATGGCTATTCAAAGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCAGCCTTTAAGATACTAAAAACTCGTTTAAAAGCTGTGCCGTCATATTCTTTCAATCGTGAGCAATTGAATAGAATGCCTTCTGGGGATTACTACGAATTTCTTCCTCAGATGCCTGATGAACATGAAAAAAAAGATGGTGATGTAACTGAAGACGGTGGGAGCTCATATAGTAGATTAAACTTTAATCAAAGGTTAAACGAGTTTCAGGAAATGCAGAAGAAACACCGGGTTCACACAAAATCACAAAGAACGTCACGCAGTTTATCGACTTCATTACCAAAGGAGGCACAAAAAGAGGAAGAGCCACAGAGACAACAGTCTATTGATCTTAATGATTTCCTGAGGGAGGTGGTGATGGAGGATTTGAAGGAAGCAATTGCAGCCAAGAGTGAATGGGTAGTTGATAGCCTCGCTCCTAGGGAGGTAGACCAAGAAACATTAGATTCCGTATATGTCGTTGCTGATAAGGGCAGTCCGAATTATGATTTCACCGAGGTGGGTTCCTCTTCAGACTTGGGAGTGATTTTCCCCCAAGGAAACAAAAGGAGCCATTTTCTAGATGAGGTTGGGTTCCACGTCTACCTTATGGATGACTTATCTCAAGATGAGACTGATCTGAAGAGGAAACTAGTGGCCTTCAAGGAAAATAAGATGAAGTGTCACCAGACGATGCTTCAAATGAAGAAAACACATAGGGACACCCCTTTGCATGCGAAAGCCATTCACATGCAAGCTACGTGA 2529 0.4187 MAEALSVMPAAVLRNLADKLYEKRKNAALEVEGIVKQLASAGDHDKITSVITLLTTEFTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAINANPAEAFDVGAILSIARRQLSSEWEATRIEALHWIAILLNRHRIEVLIYLNDIFDTLLKALSDPSDEVVLLVLDVHACIAKDSQHFRHLVVFLVHSFRLDHSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMIQALNLILLTSSELSEIRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCFLAQTYRHASTVIQSLIEEDINVKFLVQLDKLIRLLETPIFAYLRLQLLDPGRYLWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNREQLNRMPSGDYYEFLPQMPDEHEKKDGDVTEDGGSSYSRLNFNQRLNEFQEMQKKHRVHTKSQRTSRSLSTSLPKEAQKEEEPQRQQSIDLNDFLREVVMEDLKEAIAAKSEWVVDSLAPREVDQETLDSVYVVADKGSPNYDFTEVGSSSDLGVIFPQGNKRSHFLDEVGFHVYLMDDLSQDETDLKRKLVAFKENKMKCHQTMLQMKKTHRDTPLHAKAIHMQAT* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1072 842 MobiDBLite consensus disorder prediction 668 703 - -
Psa6g1072 842 SUPERFAMILY ARM repeat 11 593 IPR016024 -
Psa6g1072 842 PANTHER TAX1 BINDING PROTEIN-RELATED 4 694 IPR026825 GO:0006661|GO:0070772
Psa6g1072 842 Gene3D - 2 247 IPR011989 -
Psa6g1072 842 Gene3D - 248 410 IPR011989 -
Psa6g1072 842 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Psa6g1072 842 Coils Coil 792 812 - -
Psa6g1072 842 PANTHER PROTEIN VAC14 HOMOLOG 4 694 - -
Psa6g1072 842 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Psa6g1072 842 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1072 Psa-Chr6 41429913 41442544 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1072 6 41429913 41442544 Psa6g1072 6 41429913 41442544 ECH