Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1056 ATGAGTAGTGAAAAGATGGTTTGCATGGAATCTCGTTCTGGAAGGGCGATGCAAAGATACAATGAAACTGGTGGTCGCAAAGTTGTAGGGTGCATCCCCTACAGATATAAACAAGACATTGATGGAAATATAAGCAATGAATTGGAAGTTCTTCTTGTTAGCTCACAAAAGGGTCATGCATTCATGTTTCCAAAGGGTGGATGGGAAGTTGATGAATCTTTAGAAGAAGCAGCATGCAGAGAATCTCTTGAAGAAGCAGGAGTTGTAGGAATTGTTGAACATGAGTTAGGTGAATGGAGTTTCATTAGCAAAAGATATGGTATATACTATGAAGGTCACATGTTTCCTTTACTTGTCAAAGAACAACTTGAGTTTTGGCCAGAGAAAAATATACGGACAAGAATATGGATGAATGTTGTTGAAGCAAGAGATGTTTGTCAACATTGGTGGATGAAGGAAGCATTAGATATGCTTGTTCATAGGCTAAATCTACAGCAAAATAAGTAG 507 0.3807 MSSEKMVCMESRSGRAMQRYNETGGRKVVGCIPYRYKQDIDGNISNELEVLLVSSQKGHAFMFPKGGWEVDESLEEAACRESLEEAGVVGIVEHELGEWSFISKRYGIYYEGHMFPLLVKEQLEFWPEKNIRTRIWMNVVEARDVCQHWWMKEALDMLVHRLNLQQNK* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1056 168 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 168 - -
Psa6g1056 168 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 10 161 - -
Psa6g1056 168 CDD Nudix_Hydrolase_9 27 152 - -
Psa6g1056 168 Pfam NUDIX domain 46 146 IPR000086 -
Psa6g1056 168 ProSitePatterns Nudix box signature. 66 87 IPR020084 GO:0016787
Psa6g1056 168 ProSiteProfiles Nudix hydrolase domain profile. 24 159 IPR000086 -
Psa6g1056 168 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 168 - -
Psa6g1056 168 SUPERFAMILY Nudix 22 161 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1056 Psa-Chr6 40519968 40521351 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1056 6 40519968 40521351 Psa6g1056 6 40519968 40521351 ECH