Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1054 ATGTCGTCACCAATCGCCACCCCTTCTCCACCACCAACCACCGCCTCATCACCACCCTACGACCGCCTCAAAGCCGTCAAAGAATTCGACGAAACCAAAGCCGGAGTAAAAGGCCTCATCGACTCCGGAATCAAAACCATTCCGTCTTTCTTCATTCACCCGCCCGAAACCCTATCCGACCTCGCTCCGGGATCCGGACCCGAACCGGAAATTCCAACCATCGACCTCTCTGCTATACACGACTCCCGCGCCGCCGTCGTGGACCAGATTCGTTCCGCTGCGGGTTCCGTCGGATTCTTTCAGGTGATCAACCACGGCGTATCGCGGGAACTACTACGAAGTGTTATCGGTGCTATAAAGGCGTTTCATGAACAGCCTGCGGAGGTTAAGGGGCAGGTGTACCGTAGGCAGATAGGGACGGGCGTATCGTATATATCCAACCTCGATCTCTTCACTTCTAAAGCTGCTAGTTGGCGCGATACACTTCAGATTAGGACGGGACCTATCGCCGTAGAAGAGAAGGAGATTCCAGAGGTATGCAGGAAGGAGGTAATGGAGTGGGATAGAGAAGTAGTGCGTGTAGGAGATATTTTACTGGGTTTGTTGAGTGAAGGGTTGGGATTAGGCGAAGAAGGGTTCAAGGAATTGGATTTGTCACAAGGGAGGCTGATGGTTGGCCACTATTACCCATTTTGTCCTCAGCCTAATCTTACTGTTGGACTCAATTCCCATGCAGATCCAGGGGCGTTGACGATATTGTTGCAGGATCATATTGGTGGCTTACAGGTCAGGACCCAACAGGGTTGGGTTCATGTCAAGCCTCTTGATGGAGCCTTGGTTATCAACATTGGAGATTTACTTCAGATCATTTCTAATGAGGAGTACAAGAGTGCTGATCATAGGGTATTGGCCAATTCTTCTAATGAGCCGCGAGTCTCAAGTGCTGTTTTCCTAATGCCGGGTAACAGGGAGAAGCTCTTTGGACCTTTACCAGAGCTAACATCAGCAGAAAAACCAGCTCTTTATAGAGAGTTCACACTCAACGAATTTTTGACAAGGTTCTTCAAGAAAGAGCTAGATGGTAAATCATTGACAAATTTCTTCAGACAATGA 1113 0.4915 MSSPIATPSPPPTTASSPPYDRLKAVKEFDETKAGVKGLIDSGIKTIPSFFIHPPETLSDLAPGSGPEPEIPTIDLSAIHDSRAAVVDQIRSAAGSVGFFQVINHGVSRELLRSVIGAIKAFHEQPAEVKGQVYRRQIGTGVSYISNLDLFTSKAASWRDTLQIRTGPIAVEEKEIPEVCRKEVMEWDREVVRVGDILLGLLSEGLGLGEEGFKELDLSQGRLMVGHYYPFCPQPNLTVGLNSHADPGALTILLQDHIGGLQVRTQQGWVHVKPLDGALVINIGDLLQIISNEEYKSADHRVLANSSNEPRVSSAVFLMPGNREKLFGPLPELTSAEKPALYREFTLNEFLTRFFKKELDGKSLTNFFRQ* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1054 370 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE HOMOLOG 4-LIKE 16 358 - -
Psa6g1054 370 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 16 358 - -
Psa6g1054 370 MobiDBLite consensus disorder prediction 1 20 - -
Psa6g1054 370 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 218 320 IPR005123 -
Psa6g1054 370 Pfam 2OG-Fe(II) oxygenase superfamily 223 320 IPR044861 -
Psa6g1054 370 Gene3D - 26 352 IPR027443 -
Psa6g1054 370 MobiDBLite consensus disorder prediction 1 17 - -
Psa6g1054 370 Pfam non-haem dioxygenase in morphine synthesis N-terminal 71 167 IPR026992 -
Psa6g1054 370 SUPERFAMILY Clavaminate synthase-like 33 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1054 Psa-Chr6 40447342 40449738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1054 16 367 Glycosyltransferase AT5G59530 44.875 7.57e-100 298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1054 6 40447342 40449738 Psa6g1054 6 40447342 40449738 ECH