Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3114 ATGAACAAAAAAAGTGGTGATCAACTGAATTTTTCAGCTGAAACAGCTAAATCAGCAAGGTTCAGCCCCATTCATCTTGCTATGCAAAACGGCCAAAAGGCAATGGTGTCTAAGTTGGTTGGCATCAATAAAGATCTTGTTAGAGTTAAAGGAAGAGAAGGCTTGACTCCACTTCATTTCGCATGTCAAAATGGGGAGGTTGAACTTTCAGCTGAATTCCTCACTGCTTGTCCGGATTCCATTGAAGATGTAACTGTCAGAGGATCTGCATTGCACATTGCTGTATGA 288 0.4132 MNKKSGDQLNFSAETAKSARFSPIHLAMQNGQKAMVSKLVGINKDLVRVKGREGLTPLHFACQNGEVELSAEFLTACPDSIEDVTVRGSALHIAV* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3114 95 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 21 95 - -
Psa4g3114 95 Pfam Ankyrin repeats (3 copies) 24 95 IPR002110 GO:0005515
Psa4g3114 95 Gene3D - 2 95 IPR036770 -
Psa4g3114 95 SMART ANK_2a 19 48 IPR002110 GO:0005515
Psa4g3114 95 SMART ANK_2a 53 83 IPR002110 GO:0005515
Psa4g3114 95 ProSiteProfiles Ankyrin repeat profile. 53 74 IPR002110 GO:0005515
Psa4g3114 95 PANTHER HOMEOBOX PROTEIN WARIAI 21 95 - -
Psa4g3114 95 ProSiteProfiles Ankyrin repeat region circular profile. 53 74 - -
Psa4g3114 95 SUPERFAMILY Ankyrin repeat 18 94 IPR036770 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3114 13 95 Miscellaneous Gene Families AT5G54620 51.190 8.03e-22 85.9