Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2066 ATGTCGCAATCTGGGAAGTCTGTGCAAGAACTGGGCTATGACTCTCTTACGACTCGATTCCGTGATTCAATGAGTTGTGAAGAGAACAAGCCCGATTTCAAAGAACTCGATCTGGGTTCGTTCATTTCGCCATTGAAAATCCGTGGCGCAGGTAATGCTGGCAGCGGCAGTGGAGCTGCCGCCACTTCGAGCTCGAGCTCGAGCTCCTCCGGCTCAGTCACAGGAAGAAGCAACGCTCCCAAGTTGCCCAGAAGACTGGACGGAAAACCGAACCACCATTCCGGCGAGCTTACTGGCTATTTCGATACCAGCCCGAATGCCTCAGAGAGCCTCCGATCCGCTTCAGCAACTAGCAATTCCAAGCCGGGTCATCGGAGATCGGTTTCGGCTGGAGCCCCATTAATCTACTCCGGCGGAAGTCATAGCAGTCCGGGGAGCAGTAGTTGCTCAAACAGTGCAACGTCAGGGACCAATTTACTCCCTACTGGTAATATTTGTCCCTCGGGGAAGATCCTCAAATCGGGTATGGTGTCACGAGCTTCCAATAGAACTGATGTGTTGGGTTCTGGAACAGCTAACTATGGCCATGGTAATATAATGCGTGGTGGCATGAAATTGGGCAATTCCGGGCACGTCGTGGACGACAATGGGGCTGGGAATTCCTCGGGGGTTGTCAGACGAGCAATGAGTGATTCTGATCCGGAGGAGATGAAGAAGACTGGGAATGAGTTATACAGAAGCGGTCATTTTGTGGAGGCATTGTCATTGTACGATGGTGCTATTTCGATATCGCCGAATAATGCAGCCTACCGGAGTAACCGGGCGGCAGCGCTGACGGCGTTGGGGAGACTGGCCGAGGCAGCGAAGGAGTGCGAAGAGGCTGTAAAGTTGGAACCTACCTATGCCCGGGCGCATCAGAGGCTAGCTTCTCTTTGCCTGCGCTTTGGACGTTTGGAACATGCCAAGCGCCACCTCTATCTACCTGGGCAACATGTGGATCAATCTGAACTGCAGAAGCTGAGGTTATTGGAGAAACACATTAACCAATGTGCAGAGGGAAGAAAGATTGGCGATTGGAAGATTGCACTTGGGGAATCAAGCGCAGCCATTGCAGTTGGAGCAGATTTCTCACCTGAGCTTGTTGCTTGTAAAGCGGAAGCTTATTTAAAACTCCATCAACTGGAGGATGCTGAGTTTACTCTCTCAAACATTCCCAAGTTGGAAGGTTGTCCTTTATCCTGTTCTCAAACCAAGTTCTTTGGTATGATCGGTGAAGCCTATGTGCACTTTGTACATGCTGAGGTTCAGATGGCCGTGGGAAGGTTTGAGAATGCGGTAGCAGCTGCTGAAAAGGCTAGACTGTTAGATTACAGTAACGCAGAAGTTGAGAGGGTTCTAAATACTGTGAAAACGGTAGCAAGATCTCGCTCAAAGGGCAATGATCTTTTTAGCTCCGGCAAATTTTCTGAAGCTTGTTCTGCTTATGGGGAAGGCCTCAAATATGACAGCTGCAACTATGTTCTGTATTGTAATAGAGCTGTTTGTTGGTCTAAACTTGGACTATGGGAAAAATCTGTTGAGGATTGTAACCAAGCTCTCAACATTCTACCCAATTACACCAAGGCCCTCTTTCGCAGAGCTGCATCAAATGCAAAACTTGAAAGATGGGCTGAAGTTGCCAAAGATTATGAGACCTTAAAACAAGTACTCCCTGGAGACAATGAAGTTGTTGAATCCCTTCGTAAGGCTCAACTAGCTTTAATAAAATCTCGTGGAGAGGACTATGCAGGAAAGCTTGAAGTTGAAGTGGGAGCTGTCTCTTCAATGGATGAATTTAAAGCTGCCGTTGCTTCTGCTGGCGTTTCAGTGGTTCATTTCAAAGAGGCCTCGGATGAACTATGCGAAGAAATATCCCCATTCATAAATATGCTGTGCGTTAGATACCCATCTGTTAAATTTATCAAGGTTGATGTGGAGGAGTGTTTAGCTATAGCAAGAGCCGAGGGCGTAAGGACTGTCCCAACTTTCAAAATTTATAAAAATGGAAAGAAGGTGAAGGAGATGGTTCGGCCAACGCATCAGTTCTTAGAGGAGTCAGTGAGAAGCTGTAGTTCCCTCTGA 2121 0.4795 MSQSGKSVQELGYDSLTTRFRDSMSCEENKPDFKELDLGSFISPLKIRGAGNAGSGSGAAATSSSSSSSSGSVTGRSNAPKLPRRLDGKPNHHSGELTGYFDTSPNASESLRSASATSNSKPGHRRSVSAGAPLIYSGGSHSSPGSSSCSNSATSGTNLLPTGNICPSGKILKSGMVSRASNRTDVLGSGTANYGHGNIMRGGMKLGNSGHVVDDNGAGNSSGVVRRAMSDSDPEEMKKTGNELYRSGHFVEALSLYDGAISISPNNAAYRSNRAAALTALGRLAEAAKECEEAVKLEPTYARAHQRLASLCLRFGRLEHAKRHLYLPGQHVDQSELQKLRLLEKHINQCAEGRKIGDWKIALGESSAAIAVGADFSPELVACKAEAYLKLHQLEDAEFTLSNIPKLEGCPLSCSQTKFFGMIGEAYVHFVHAEVQMAVGRFENAVAAAEKARLLDYSNAEVERVLNTVKTVARSRSKGNDLFSSGKFSEACSAYGEGLKYDSCNYVLYCNRAVCWSKLGLWEKSVEDCNQALNILPNYTKALFRRAASNAKLERWAEVAKDYETLKQVLPGDNEVVESLRKAQLALIKSRGEDYAGKLEVEVGAVSSMDEFKAAVASAGVSVVHFKEASDELCEEISPFINMLCVRYPSVKFIKVDVEECLAIARAEGVRTVPTFKIYKNGKKVKEMVRPTHQFLEESVRSCSSL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2066 706 MobiDBLite consensus disorder prediction 1 20 - -
Prci7g2066 706 CDD TRX_family 610 697 - -
Prci7g2066 706 SMART tpr_5 234 267 IPR019734 GO:0005515
Prci7g2066 706 SMART tpr_5 540 573 IPR019734 GO:0005515
Prci7g2066 706 SMART tpr_5 426 459 IPR019734 GO:0005515
Prci7g2066 706 SMART tpr_5 472 505 IPR019734 GO:0005515
Prci7g2066 706 SMART tpr_5 268 301 IPR019734 GO:0005515
Prci7g2066 706 SMART tpr_5 506 539 IPR019734 GO:0005515
Prci7g2066 706 Gene3D Tetratricopeptide repeat domain 232 592 IPR011990 GO:0005515
Prci7g2066 706 SUPERFAMILY TPR-like 233 461 IPR011990 GO:0005515
Prci7g2066 706 MobiDBLite consensus disorder prediction 139 164 - -
Prci7g2066 706 MobiDBLite consensus disorder prediction 97 125 - -
Prci7g2066 706 SUPERFAMILY TPR-like 472 584 IPR011990 GO:0005515
Prci7g2066 706 Gene3D Glutaredoxin 594 703 - -
Prci7g2066 706 MobiDBLite consensus disorder prediction 1 31 - -
Prci7g2066 706 MobiDBLite consensus disorder prediction 47 164 - -
Prci7g2066 706 ProSiteProfiles TPR repeat profile. 234 267 IPR019734 GO:0005515
Prci7g2066 706 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 21 701 IPR044534 -
Prci7g2066 706 SUPERFAMILY Thioredoxin-like 606 691 IPR036249 -
Prci7g2066 706 MobiDBLite consensus disorder prediction 56 77 - -
Prci7g2066 706 Pfam Thioredoxin 608 692 IPR013766 -
Prci7g2066 706 FunFam TPR repeat-containing thioredoxin TTL4 598 704 - -
Prci7g2066 706 Pfam Tetratricopeptide repeat 241 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2066 Prci-Chr7 34681303 34685004 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1320 6 9617951 9622318 Prci7g2066 7 34681303 34685004 CCT
Prci7g2066 7 34681303 34685004 Prci7g2066 7 34681303 34685004 ECH