Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1355 ATGAGAGAGGAAGAAATTGAGAAACTTCGAGGTGTTGTGAGGGACTGCGTAAGCAAGCACCTCTACTCTTCCGCCATCTTCTTTGCAGATAAGGTCGCCGCCTTTACCAATGATCCCGCCGATATCTACATGCAGGCTCAGGCCCTCTTCCTCGGCCGCCATTACCGTCGCGCTTTTCACCTCCTCAATGCCTCTAAGATAGTTCTCCGTGATCTCCGCTTCCGCTACCTCGCTGCCAAGTGTCTAGAGGAGCTCAAGGAATGGGATCAATGCTTATTAATGCTGGGTGAGGCTAAAGTGGATGAACAAGGCAATGTTTCAGACACAAAGGATTCTAATGTCATGTACTTGGATAAAGATGGTGAAGATCGTGAGATCAATATATCTTCTGCAATATGTTTCTTAAGAGGCAAAGCACATGAAGCTCTGGAAAACCGTGCCCAGGCTCGATTGTGGTACAAAGCTGCTATAAAAGCTGACCCTTTATGCTATGAGGCTCTGGAATGTCTTATTGAAAATCACATGCTCACATGTGAGGAGGAAGCAAATTTGATTTCATCATTGCAATTTGGTAGTGAAGATGGATGGCTTTCTTCATTCTATTCATGCTTGATAAAGAAGTATGAGAAGGAAAATGTTGTGGAAGCAAAGTTTCGAGACCTTGAGAACACAAGCTGTAAAATTGACCAATCTAATCCTTCTTTCTTGCGTACACTGAAAACCAACACTGACCTATTAGCCTGCAAAGCTGAATACTACCATCAGTGTGGTGAATATCAGAAATGTTTTGAGTTAACATCTGTTCTGCTTGAGAAGGATCCTTTCCATAACAAGACTACCTTAGTACATCTGGCAGCTGCTATGGAGCTTGGACATTCAAATGAGCTCTATCTGATGGCATGCAATCTGGTGAAGGATTATCCTCAAAAGGCTTTATCTTGGTTTGCGGTTGGTTGCTATTACTATTGTATCAAGAAGTATGACCAGTCCCGTCGATATTTCAGCAAGGCAACGAGTCTAGATGGAACGTTTGCACCAGCATGGATAGGCTATGGGAATGCTTATGCTGCTAAAGAAGAGGGTGATCAAGCAATGTCGGCTTACCGCACTGCAGCTCGTTTATTTCCCGGGTGCCATTTGCCAACTCTTTACATTGGAATGGAATGCATGCGAACCCACAGCTATAAGCTTGCTGAGCAGGTGCCTATTACTAAACATATTGTCAAGTATATTTTTTTGCAGGCTAAGGCGATTTGCCCCTCTGATCCACTTGTATTTAATGAACTTGGAGTTGTTGCCTACCATATGCAAGAGTATAACAAAGCAGTGTGGTGGTTTGAGAAAACATTAGCCCTCATCCCATCCTCATTAAGTGAAATGTCGGAACCAACCGTAGTTAACCTTGCCCATGCCTACAGGAAGTTGAAGATGTATGATGAAGCAATTTCATACTACGAGAAAGCACTTGCATTATCAACAAGAAGTCTGAGCACGTATGCTGGTCTAGCATATGCATACCACTTGCAGGATGACTTCACTACGGCTATTACTTATTATCACAAAGCTTTGTGGCTTAAACCAGATGACCCATTCTGCACAGAAATGTTAAGTTGGGCTTTAATTGACGAAAGCCGGTGTGGGATGCCATCGATTCCTTAG 1659 0.434 MREEEIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTNDPADIYMQAQALFLGRHYRRAFHLLNASKIVLRDLRFRYLAAKCLEELKEWDQCLLMLGEAKVDEQGNVSDTKDSNVMYLDKDGEDREINISSAICFLRGKAHEALENRAQARLWYKAAIKADPLCYEALECLIENHMLTCEEEANLISSLQFGSEDGWLSSFYSCLIKKYEKENVVEAKFRDLENTSCKIDQSNPSFLRTLKTNTDLLACKAEYYHQCGEYQKCFELTSVLLEKDPFHNKTTLVHLAAAMELGHSNELYLMACNLVKDYPQKALSWFAVGCYYYCIKKYDQSRRYFSKATSLDGTFAPAWIGYGNAYAAKEEGDQAMSAYRTAARLFPGCHLPTLYIGMECMRTHSYKLAEQVPITKHIVKYIFLQAKAICPSDPLVFNELGVVAYHMQEYNKAVWWFEKTLALIPSSLSEMSEPTVVNLAHAYRKLKMYDEAISYYEKALALSTRSLSTYAGLAYAYHLQDDFTTAITYYHKALWLKPDDPFCTEMLSWALIDESRCGMPSIP 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1355 552 ProSiteProfiles TPR repeat profile. 496 529 IPR019734 GO:0005515
Prci6g1355 552 SMART tpr_5 345 378 IPR019734 GO:0005515
Prci6g1355 552 SMART tpr_5 130 163 IPR019734 GO:0005515
Prci6g1355 552 SMART tpr_5 496 529 IPR019734 GO:0005515
Prci6g1355 552 SMART tpr_5 462 495 IPR019734 GO:0005515
Prci6g1355 552 SMART tpr_5 243 276 IPR019734 GO:0005515
Prci6g1355 552 SMART tpr_5 311 344 IPR019734 GO:0005515
Prci6g1355 552 SMART tpr_5 423 456 IPR019734 GO:0005515
Prci6g1355 552 PANTHER CELL DIVISION CYCLE 16,23,27 22 533 - -
Prci6g1355 552 ProSiteProfiles TPR repeat profile. 423 456 IPR019734 GO:0005515
Prci6g1355 552 ProSiteProfiles TPR repeat profile. 462 495 IPR019734 GO:0005515
Prci6g1355 552 Pfam Tetratricopeptide repeat 132 161 IPR019734 GO:0005515
Prci6g1355 552 Pfam Anaphase-promoting complex, cyclosome, subunit 3 19 97 - -
Prci6g1355 552 Gene3D Tetratricopeptide repeat domain 5 542 IPR011990 GO:0005515
Prci6g1355 552 ProSiteProfiles TPR repeat profile. 345 378 IPR019734 GO:0005515
Prci6g1355 552 ProSiteProfiles TPR repeat profile. 311 344 IPR019734 GO:0005515
Prci6g1355 552 Pfam Tetratricopeptide repeat 467 491 IPR001440 GO:0005515
Prci6g1355 552 SUPERFAMILY TPR-like 37 173 IPR011990 GO:0005515
Prci6g1355 552 SUPERFAMILY TPR-like 246 530 IPR011990 GO:0005515
Prci6g1355 552 Pfam Tetratricopeptide repeat 498 529 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1355 290 533 Glycosyltransferase AT3G04240 24.096 3.36e-11 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1355 6 9901815 9912638 Prci6g1355 6 9901815 9912638 ECH