Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2329 ATGGTTTCAAGATCTTACTCAAACCTATTGGACCTGGCCTCTGGCGACTCTCCATCATTTGGGTTTATGAACCGTGGGATTCCCAGGATTATGACAGTGGCTGGTTTGATTTCTGAGGTTGATGACGACCCAGTGGAGAGTGTGAACTCTGATCCCTCGTCGTCGTCGGTCCACCGTGAGCGGATCATAATTGTTGCGAACCAGCTTCCAATCAGGGTTCAGAGGAAGCCAGACGGCGGTGGTAGTAGTAGTACTAGGAATTGGTTGTTCCAGTGGGATGATAATTCACTTCTCCTTCAGTTGAAAGATGGATTAGGTGATGATGATATTGAAGTTATTTATGTTGGGTGTCTCAAGGAAGAAATCCACCCAAATGAACAAGATGAGGTCTCACAGTTCCTCCTTGAAAATTACAGATGTGTCCCCACTTTTCTCCTTCCTGATCTGTTTTCAAGATACTATCATGGGTTTTGCAAGCAGCAGCTATGGCCTTTGTTTCACTACATGCTGCCTCTGTCACCAGAACTTGGGGGCAGATTCAATAGGTCACTGTGGCAGGCTTATGTCTCTGTGAATAAGATTTTTGCTGATCGAATTATGGAAGTGATTAACCCTGAAGACGATTATGTTTGGATCCATGATTATCATCTCATGGTGCTGCCTACATTCTTGAGGAAGAGATTCAACAGAGTTAAACTTGGGTTCTTCCTCCATAGCCCATTCCCTTCTTCAGAAATTTACAAGACATTGCCCATTAGAGAAGAGCTACTGAGAGCTCTTTTGAATTCAGATTTGATAGGTTTCCACACATTTGATTATGCGCGGCATTTCCTGTCCTGTTGTAGCCGGATGCTTGGCCTTAGCTACGAATCAAAGCGGGGTTATATTGGGCTTGAGTATTATGGTAGGACTGTTAGCATCAAAATTCTTCCTGTTGGTATCCACATGGGTCAGCTTCAACAAGTGTTAAGCCTTGCTAAGACAGAAGGGAAAGTTGCTGAGCTCATTGAGCAATTTTCAGGTCGGGGAAGGACATTGATGCTTGGAGTTGATGACATGGATATCTTTAAGGGAATAAGTTTGAAGCTTTTGGCCATGGAGCAGCTTCTTATTCAACATCCAGAGTGGCAAGGGAAGGTTGTATTGGTCCAAATTGCTAACCCGGCCCGGGGGAAAGGGAAAGATGTGAAGGAAGTGCAAACTGAGACAAAGGCAACGGTTAAAAGGATTAATGAATCGTTTGGGAAACCTGGGTATGATCCTGTCATTCTGATTGAGGAGCCACTGAAGTTCTATGAGAAAGTTGCATACTACACGGTTGCTGAGTGTTGTCTAGTCACTGCTGTTAGGGATGGAATGAATCTCATACCGTATGAATACATAATCAGTCGTCAAGGAAATGAAACATTGGACAAAGTTTTGGGACTGTCTTCCTCTCCTAAGAAGAGCATGCTGGTTGTCTCTGAGTTCATAGGTTGTTCCCCATCTTTAAGTGGAGCGATCAGAGTGAACCCATGGAATATTGATGCAGTAGCAGATGCAATGGACTCTGCCCTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCATGAGAAGCATTATAGATATGTAAGTACCCATGATGTTGGGTACTGGGCTCGAAGCTTCTTGCAGGATTTGGAAAGGACTTGTAGTGATCATGTCCGACGAAGGTGGTGGGGAATTGGGTTTGGATTAGGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTCAGCCTACAAGTGGACGAAAACTCGGGCGATCCTTTTAGATTATGATGGTACACTAATGCCTCAAGCTTCCATTGATAAGAGTCCGACAGGTAAATCTATTGAGATTCTTAGTAGCTTGTGCAGAGACAAGAACAACATGGTGTTTCTTGTTAGTGCTAGAAGCCGAAAAACTCTTGCTGAATGGTTTTCTCCTTGTGAGAACCTGGGGATTGCAGCTGAGCATGGTTACTTTTTAAGACTGAAGCGTGATGCAGAATGGGAAACATGTGGGCCCGCAACAGACTGTAGTTGGAAACAAATTGCTGAGCCTGTGATGAAGCTTTATACTGAAACAACTGACGGATCCACGATAGAAGATAAAGAGACTGCACTTGTGTGGTGCTATGAGGATGCAGATCCAGATTTTGGGTCATGCCAAGCCAAGGAACTTCTTGATCATCTTGAAAGTGTGCTTGCAAATGAACCTGTTACTGTCAAAAGTGGCCAGAACATTGTAGAGGTTAAACCACAGGGGGTGAGCAAAGGGATTGTGGTGAAGCGCCTGCTTTCGACCATGCAAGAAAATGAAATATCACCTGATTTTGTGTTGTGCATAGGAGATGATAGGTCTGATGAAGACATGTTTGAGGTAATCTCCAGTTCCATGGCTGGTCCTACCCTTGCACCGAGGGCCGAAGTATTTGCATGCACGGTTGGCCGGAAGCCGAGCAAAGCCAAGTACTATCTTGATGATACAGCTGAAATAGTGAGATTGATACAAGGGCTGGCATGCGTCTCAGAGCAAACACATGGAAGAAAAGCTGATGTACAGGATCATCTCCAAAATGACTTTTCTGATCAGTGTCAGCTACATTACCTTTCTCCTGCTCCAATTTCAATAACACATCCATTAGCCTCGTTTATTTCGTCATAA 2691 0.4418 MVSRSYSNLLDLASGDSPSFGFMNRGIPRIMTVAGLISEVDDDPVESVNSDPSSSSVHRERIIIVANQLPIRVQRKPDGGGSSSTRNWLFQWDDNSLLLQLKDGLGDDDIEVIYVGCLKEEIHPNEQDEVSQFLLENYRCVPTFLLPDLFSRYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQQVLSLAKTEGKVAELIEQFSGRGRTLMLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGKGKDVKEVQTETKATVKRINESFGKPGYDPVILIEEPLKFYEKVAYYTVAECCLVTAVRDGMNLIPYEYIISRQGNETLDKVLGLSSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLGFRVVALDPNFRKLSMEHIVSAYKWTKTRAILLDYDGTLMPQASIDKSPTGKSIEILSSLCRDKNNMVFLVSARSRKTLAEWFSPCENLGIAAEHGYFLRLKRDAEWETCGPATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGIVVKRLLSTMQENEISPDFVLCIGDDRSDEDMFEVISSSMAGPTLAPRAEVFACTVGRKPSKAKYYLDDTAEIVRLIQGLACVSEQTHGRKADVQDHLQNDFSDQCQLHYLSPAPISITHPLASFISS 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2329 896 CDD GT20_TPS 61 554 IPR001830 GO:0003824|GO:0005992
Prci5g2329 896 Pfam Trehalose-phosphatase 604 838 IPR003337 GO:0003824|GO:0005992
Prci5g2329 896 Gene3D - 600 732 IPR023214 -
Prci5g2329 896 Gene3D - 733 865 IPR023214 -
Prci5g2329 896 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 849 IPR001830 GO:0003824|GO:0005992
Prci5g2329 896 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 600 717 - -
Prci5g2329 896 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 320 - -
Prci5g2329 896 Pfam Glycosyltransferase family 20 61 554 IPR001830 GO:0003824|GO:0005992
Prci5g2329 896 FunFam Alpha,alpha-trehalose-phosphate synthase 322 538 - -
Prci5g2329 896 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 557 - -
Prci5g2329 896 NCBIfam trehalose-phosphatase 599 848 IPR003337 GO:0003824|GO:0005992
Prci5g2329 896 CDD HAD_TPP 602 843 - -
Prci5g2329 896 Gene3D Glycogen Phosphorylase B; 322 538 - -
Prci5g2329 896 NCBIfam HAD-IIB family hydrolase 603 804 IPR006379 -
Prci5g2329 896 Gene3D Glycogen Phosphorylase B; 53 321 - -
Prci5g2329 896 SUPERFAMILY HAD-like 601 849 IPR036412 -
Prci5g2329 896 FunFam Trehalose-6-phosphate synthase 10 731 859 - -
Prci5g2329 896 FunFam Trehalose-6-phosphate synthase 2 684 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2329 Prci-Chr5 40186001 40192531 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2329 1 854 Trehalose Biosynthesis Gene Families AT1G68020 80.997 0.0 1454
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g2329 5 40186001 40192531 Prci5g2329 5 40186001 40192531 ECH