Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2310 ATGGCGACTATGACGAGCTTGATCGGACTAATCAATAAGATTCAACGGGCGTGCACAATTTTAGGTGACCATGGTGGCGAGGGGTTGTCCCTCTGGGAGGCCCTTCCCTCTGTGGCTGTGGTCGGAGGCCAGAGTTCAGGGAAATCGTCTGTGTTGGAAAGTGTGGTCGGAAGGGATTTTCTGCCTCGAGGGTCTGGCATTGTGACAAGGAGGCCACTAGTGCTTCAACTTCATAAGACTGAAGATGGGCAGCAAGAATATGCCGAGTTTCTCCATGCACCAAGAAAGAGATTCAATGACTTTGCTTCTGTGAGGAAGGAAATATCAGATGAAACAGATCGTATAACTGGGAAGACAAAGCAAATTTCGCACGTTCCAATTCATCTCAGCATATATTCTCCGCATGTTGTGAACTTAACCCTCATAGATCTTCCTGGATTGACGAAGGTTGCAGTAGAGGGACAATCAGAAACTATAGTTGAAGATATTGAAAGCATGGTTCGCTCATATGTTGAGAAGCCAAACTGCATCATATTGGCTATTTCTCCAGCAAACCAAGATATTGCCACTTCAGATGCTATAAAACTTGCTAAAGAAGTTGATCCTACAGGTGAAAGAACATTTGGAGTGTTGACAAAACTGGATCTAATGGATAAAGGAACCAATGCCGTTGATGTACTTGAAGGAAGGCAATACAGGCTGCAGCATCCATGGGTTGGAATTGTCAACCGTTCACAAGCTGATATTAATAAAAATGTTGACATGATTGTTGCTCGTAAGAAGGAACGTGAATATTTCGAGACAAGCCATGAATATGGACATTTGGCTCATAAAATGGGCTCAGAGTATCTTGCTAAGCTTTTATCTCAGCATTTGGAGATTGTTATCAGGCAGAAGATTCCCAGCATCATTGCCTTGATAAATAAGACTGTTGATGAGCTTAATGCAGAATTGGACCGCATTGGCAGGCCTATCGCTGTAGATTCCGGGGCCCAGCTATACACGATTTTAGAGATGTGTCGTGCACTTGACAAAGTATTTAGAGAACACCTCGATGGGGGGCGTCCTGGTGGGGATCGGATAAATGGAGTTTTCGACCACCAACTGCCAGCTGCTTTGAAAAAACTCCCATTTGATCGTCACCTAACCTTAAATAATGTACAGAGGGTTGTTACAGAAGCTGATGGATATCAGCCTCATCTGATAGCTCCAGAGCAAGGGTATAGAAGACTTATTGAAGGATCTATCAGCTACTTCAAAGGCCCTGCTGAAGCTTCCGTGGATGCTGTTCACTTCATTCTAAAGGAACTTGTACGGAAGTCGATTTCAGAAACTGAGGAATTGAAAAGATTTCCAACACTCCAGTCTGATATAGCTGCTTCTGCTAATGAGTCATTGGAGAGATTTCGAGATGAAAGCAGGAAGACAGTTTTACGGCTGGTTGACATGGAGGCTAACTATCTAACAGTGGAATTCTTCCGCAAGATTAATGATGAACCAAATCGGACTGGTCCAAATGCCGAAAAGGAAAAGGAAAAGAGAAAGGACAAGTTCATTGACAATTTCTCAGACAGTCACCTTAGGAAGATAGCATCAAATGTTAGCGCCTATATCCAAATGGTTCTGGATACACTAAAAAATTCGGTACCCAAGGCTGTGGTTTATTGTCAAGTTAGAGAGGCTAGGAGATCATTACTTAACCAGTTTTATGTTCAAATTGGGAAGAGAGAGAAGGAGCAATTGAGTGCCATGTTGGATGAAGATCCGGTGCTCATGGAAAAAAGAGTACAAATAGCAAAAAGGCTTGAACTGTACAAGCAAGCCAGGGATGACATTGACGCTGTGGCTTGGAAATAA 1857 0.4319 MATMTSLIGLINKIQRACTILGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGQQEYAEFLHAPRKRFNDFASVRKEISDETDRITGKTKQISHVPIHLSIYSPHVVNLTLIDLPGLTKVAVEGQSETIVEDIESMVRSYVEKPNCIILAISPANQDIATSDAIKLAKEVDPTGERTFGVLTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINKNVDMIVARKKEREYFETSHEYGHLAHKMGSEYLAKLLSQHLEIVIRQKIPSIIALINKTVDELNAELDRIGRPIAVDSGAQLYTILEMCRALDKVFREHLDGGRPGGDRINGVFDHQLPAALKKLPFDRHLTLNNVQRVVTEADGYQPHLIAPEQGYRRLIEGSISYFKGPAEASVDAVHFILKELVRKSISETEELKRFPTLQSDIAASANESLERFRDESRKTVLRLVDMEANYLTVEFFRKINDEPNRTGPNAEKEKEKRKDKFIDNFSDSHLRKIASNVSAYIQMVLDTLKNSVPKAVVYCQVREARRSLLNQFYVQIGKREKEQLSAMLDEDPVLMEKRVQIAKRLELYKQARDDIDAVAWK 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2310 618 FunFam dynamin-related protein 1E 4 310 - -
Prci5g2310 618 PRINTS Dynamin signature 133 150 IPR022812 -
Prci5g2310 618 PRINTS Dynamin signature 225 244 IPR022812 -
Prci5g2310 618 PRINTS Dynamin signature 60 77 IPR022812 -
Prci5g2310 618 PRINTS Dynamin signature 183 201 IPR022812 -
Prci5g2310 618 PRINTS Dynamin signature 35 53 IPR022812 -
Prci5g2310 618 PRINTS Dynamin signature 202 218 IPR022812 -
Prci5g2310 618 SMART GED_2 522 615 IPR003130 GO:0003924|GO:0005525
Prci5g2310 618 Pfam Dynamin central region 222 489 IPR000375 -
Prci5g2310 618 Pfam Dynamin GTPase effector domain 524 615 IPR003130 GO:0003924|GO:0005525
Prci5g2310 618 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Prci5g2310 618 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Prci5g2310 618 PANTHER DYNAMIN 6 615 IPR022812 -
Prci5g2310 618 Gene3D - 4 310 IPR027417 -
Prci5g2310 618 ProSiteProfiles GED domain profile. 527 618 IPR020850 -
Prci5g2310 618 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Prci5g2310 618 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Prci5g2310 618 FunFam Dynamin-related protein 1C 332 595 - -
Prci5g2310 618 Gene3D Dynamin, middle domain 334 595 - -
Prci5g2310 618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 309 IPR027417 -
Prci5g2310 618 Pfam Dynamin family 38 213 IPR045063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2310 Prci-Chr5 40084194 40093019 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g2310 5 40084194 40093019 Prci5g2310 5 40084194 40093019 ECH