Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2292 ATGGAGAGAGATTTCATGGGTTTAAGCTCAAAAGAACCTTTAGCTATGGTGAAGGAGGAGATTACAAATGATGGATGCAAAGATTCAGGCTTTAATAAGAGTTCGGTTGCACAATGGCCCTTCTCGAACAAAGTCTCTGCTCTCCCACATTTGATGTCTTTTAAGGTTTCTCAAGATGACAAGACCAAGAAGATGGGGTCTGATCCCCTCACATATGCTGGATTTATGGCTATCTCAAATCCGGATGCATTTGATGCTGCTCAAAAGCGCTCTGCTGCTGAAATCCAGAAACCTTTCAATCACGATGGGCAAGGTGGTATTCACTTTTCCCTGACTCCGTATCCTGTACCAAATGATGTGCATTTGCTGAATCGTTCTCAAGATGTGAAGATGTTTTCAGCTCCCAATCAAGCAATTTCTGTTTCCATGGGATACTCTTTCTTGAAGAACCATTTCACCACAGTGGGTCAGCATATGGTTGGTAATGATGTAAAGCAACAGCTGCTAGGGGGTATGCCTGTTACTTTGCCTCATTTAGTCCCCACTGAAATCGGTTCTGTTGCAGCTATGACTGAATCATGTTTGAAGCCATCTGCTCCACCCAGTCAACTCACCATTTTCTATGCTGGTACTGTGAATGTTTTTGATGATATCTCCCCTGAGAAGGCACAAGCTATCATGTTGTTGGCTGCGAATGGGTTACCTGTGACTTCAAACAAGGCACAGCTGAACGTTCAGGCACCAAACTCGAAGCTGACTTCAGGCGAAGGTGTTCCTGTGAGTCATCCTATAAATACATCACCTTGCCCTGGTCTTTCCAGTCCTCTATCTGTGTCTTCACATACAGGCACACAGTCAAGGAGTGGCTCAAGTAGCACTGATGAGCTTCTGGCAGTTAAAACAACTGGAGTTCCCACCACTCTTGTTAGCAAAGTGGAGCCTCCAAAAGTAGTTAATGCAACTGCTATGTTGCCTTCTGCTGTGCCACAGGCTCGTAAAGCATCATTGGCACGGTTTTTGGAGAAGCGCAAAGAAAGGGTGATGAATGCAGCAGCACCATATAACCTAAGCAAGAAATCCGAGGATGTTGCTAATTTCTCTGCAACTACCTCTGCTGGTTCTAATATTCTATCAGCCAAGCAAGCATAG 1149 0.4473 MERDFMGLSSKEPLAMVKEEITNDGCKDSGFNKSSVAQWPFSNKVSALPHLMSFKVSQDDKTKKMGSDPLTYAGFMAISNPDAFDAAQKRSAAEIQKPFNHDGQGGIHFSLTPYPVPNDVHLLNRSQDVKMFSAPNQAISVSMGYSFLKNHFTTVGQHMVGNDVKQQLLGGMPVTLPHLVPTEIGSVAAMTESCLKPSAPPSQLTIFYAGTVNVFDDISPEKAQAIMLLAANGLPVTSNKAQLNVQAPNSKLTSGEGVPVSHPINTSPCPGLSSPLSVSSHTGTQSRSGSSSTDELLAVKTTGVPTTLVSKVEPPKVVNATAMLPSAVPQARKASLARFLEKRKERVMNAAAPYNLSKKSEDVANFSATTSAGSNILSAKQA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2292 382 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 138 360 IPR040390 -
Prci5g2292 382 SMART tify_2 197 232 IPR010399 -
Prci5g2292 382 ProSiteProfiles Tify domain profile. 197 232 IPR010399 -
Prci5g2292 382 MobiDBLite consensus disorder prediction 248 294 - -
Prci5g2292 382 Pfam Jas motif 329 354 IPR018467 -
Prci5g2292 382 Pfam tify domain 199 231 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2292 Prci-Chr5 39915788 39919356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2292 39 360 Tify Gene Family AT3G17860 35.756 6.58e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci5g2292 tify 6.7e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g2292 5 39915788 39919356 Prci5g2292 5 39915788 39919356 ECH