Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2086 ATGTCTCCAATTTCAAAGCAGTTTTCAGGTGATTTCGAAAGCAAGCCACTTCCAACTGATCTTCAAACTCGAAAGGATATCCAAGTCATGATGCCAAACTTGGATCTTGAAGTGGAGGCTTCTGCCGAAAATGAATCTGAAATTATCAGCCAGGTTGCATCCAACATATTCATTCATGAAATATCTGCAGGTCCTTCTAGTGACAGCCTCAACAACGCATCTGACAACACCAATAATATTGGATTTCGACTAAACAATGCAGATCCTCTTTCACTTGACTTAACTCTCAGCTTCAATAACAACGAGGTAGGCCCCACTAGAGACTCCGTAGGACTCTCATTCTCAAGCACCAGTGAGAGTAGCAATGAACCTGCCTCTCAAACCACTTCAGCCACCATCCAAAGAGTCTTCTCTTGCAACTACTGTCAGCGCAAGTTCTTCAGCTCACAGGCTCTTGGTGGCCACCAGAATGCACACAAGAGGGAAAGAACACTAGCAAAGAGAGCTATGAGAATGGGCTTTTTCTCTGAGAGGTATGCGAGTTTAGCATCCCTCCCTCTTCATGGCTCTTTTAGGTCCTTAGGGATAAAAGCTCACTCCTCAATTCACCATGGCTTTTCACCATCAATGATGAGGCCTTATGAGATTAAAAGCAATTCAAGATTTGATCAGGGTTATGTTGGAATGCCCATGTTCATGGAGGATGATGAGGCGGAACTGCTATGGCCTGGTAGTTTCCGTCAGGTTGGAGAGGTAAGTGATAACGATAATACTCATCATCATGATCATCATCAGAAGTTCGTGGTCACTGGAAGTTCAAATTTGAGTTTTGCAGAAGTGAATCCAGAAGTACACCTTGAGCTAGAGGACTCCACACCGGATTTAACATTGAAACTTTGA 900 0.4367 MSPISKQFSGDFESKPLPTDLQTRKDIQVMMPNLDLEVEASAENESEIISQVASNIFIHEISAGPSSDSLNNASDNTNNIGFRLNNADPLSLDLTLSFNNNEVGPTRDSVGLSFSSTSESSNEPASQTTSATIQRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSERYASLASLPLHGSFRSLGIKAHSSIHHGFSPSMMRPYEIKSNSRFDQGYVGMPMFMEDDEAELLWPGSFRQVGEVSDNDNTHHHDHHQKFVVTGSSNLSFAEVNPEVHLELEDSTPDLTLKL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2086 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 137 164 IPR013087 -
Prci2g2086 299 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 85 227 IPR044246 GO:0009788
Prci2g2086 299 MobiDBLite consensus disorder prediction 109 129 - -
Prci2g2086 299 Gene3D Classic Zinc Finger 114 181 - -
Prci2g2086 299 FunFam Zinc finger protein 2 114 183 - -
Prci2g2086 299 SUPERFAMILY beta-beta-alpha zinc fingers 134 164 IPR036236 -
Prci2g2086 299 ProSitePatterns Zinc finger C2H2 type domain signature. 139 159 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2086 Prci-Chr2 15976760 15982313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2086 119 299 C2H2 Transcription Factor Family AT1G66140 49.528 2.28e-49 163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g2086 2 15976760 15982313 Prci2g2086 2 15976760 15982313 CCT
Prci2g2086 2 15976760 15982313 Prci2g2086 2 15976760 15982313 ECH