Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2054 ATGGCGAGTCCCTCTCTACTCTTTCTTCTCCTCGCCACCACCATCCCTTACACTTTGTCTAGCTCACCCCCCGTAGACTCCTTCATCTTCGCCGGCTGCACCCAAGAGAAATACTCGCCGGACTCCCCTTACTCCTCCAACCTCCAGGCCTTGCTCACCTCCCTCCTTAGCTCCGCCACCTACTCTTCCTACTCCAACTTTACCGTCCTCGGCTCCTCCGTCGTCTACGGCCTCTACCAATGCCGCGGCGACCTCTCCATGCCCGACTGCTCCTCCTGCGTCTCCCGCTCTCTCACCCGCGTCTCCGCCCTCTGCCCCTCCACATGCGGCGCCGCCGTCCAGCTCGAGGGCTGCTTCGTCAAGTATGATAATGCCACCTTCGTCGGCGTCGAGGACAAGACCGTCGTTTTCAAGAAATGCGGACCTTCCGTGGGAAGCAGCGACAATATGGGGAGCACCGAAGCGGTGTTATCTGGGTTGTCGGGTTCGGGCGGATATTTCAGGGTGGTCGGGTCGGGTAAAGTGAAGGGTGTGGGCCAGTGTACCGGCGATCTCGGGTTCGATCAGTGCCAGGACTGCCTCTCGGAGGCGATCCGACGGCTCCGGAGCGACTGTGGAACTGCTAATTATGGGGACTTGTTCTTGGGCAAGTGTTATGCGAGATACTCTGTTGGTGGGGCCCACGCTTATGAACCCAAGGCCCATGGGAAATCAAAGAATGGAGGAGAAAAGACATTTGTGATTATAATTGGATTATTAGCAGGAATAGCTGTCCTCGTTATTTTCTTTGCTTTCTTAAAGACCACTTGTGCTGGTCGACATGGTAAATAA 831 0.5608 MASPSLLFLLLATTIPYTLSSSPPVDSFIFAGCTQEKYSPDSPYSSNLQALLTSLLSSATYSSYSNFTVLGSSVVYGLYQCRGDLSMPDCSSCVSRSLTRVSALCPSTCGAAVQLEGCFVKYDNATFVGVEDKTVVFKKCGPSVGSSDNMGSTEAVLSGLSGSGGYFRVVGSGKVKGVGQCTGDLGFDQCQDCLSEAIRRLRSDCGTANYGDLFLGKCYARYSVGGAHAYEPKAHGKSKNGGEKTFVIIIGLLAGIAVLVIFFAFLKTTCAGRHGK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2054 276 ProSiteProfiles Gnk2-homologous domain profile. 26 127 IPR002902 -
Prci2g2054 276 Gene3D - 145 225 IPR038408 -
Prci2g2054 276 Gene3D - 25 127 IPR038408 -
Prci2g2054 276 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 270 - -
Prci2g2054 276 FunFam cysteine-rich repeat secretory protein 3 25 127 - -
Prci2g2054 276 Pfam Salt stress response/antifungal 171 223 IPR002902 -
Prci2g2054 276 Pfam Salt stress response/antifungal 33 124 IPR002902 -
Prci2g2054 276 ProSiteProfiles Gnk2-homologous domain profile. 128 227 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2054 Prci-Chr2 15653568 15655894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2054 6 224 Pollen Coat Proteome AT4G20670 22.449 6.25e-16 73.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g2054 2 15653568 15655894 Prci2g2054 2 15653568 15655894 CCT
Prci2g2054 2 15653568 15655894 Prci2g2054 2 15653568 15655894 ECH