Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g2043 ATGGCTTTGCATTTGCTTCTGCTGCTTCTTACAGTCCTTGCTGCTGCTGCCGATAACGAGCCGTTTATTGGTGTGAACATTGGGACAGATCTCTCAGACATGCCACACCCAACACAAGTTGTAGCACTACTTAAAGCCCAGCAAATCCGACATGTTCGATTGTATGATGCTGATCAAGCTATGCTCATTGCACTTTCCAAGTCAGGCATTGAAGTTGTTGTATCTGTCCCTAATGAAGAGCTGCTGGCAATAGGTCAATCAAACTCCACAGCTGCTAACTGGGTTTCACGCAATGTCGTTGCGCATTACCCGGCCACCAACATCACAACCATTTGTGTTGGCTCTGAGGTTCTGACCACCCTCCCAAATGCAGCCAAAGTCCTTGTCAATGCCATTAAGTACATTCACTCAGCCCTCGTGGCAACAAACCTTGATCGACAAATCAAAGTCTCAACCCCTCTCCCTTCCACCATCATCCTCGATTCATTCCCTCCTTCCCAGGCCTTTTTCAATCGATCCATGAACTCTATTTTGGTCCCATTGCTTGATTTCTTGCAGTCCACGGACTCTTACCTTATGCTTAATGTGTATCCTTACTATGATTACATGAAGTCCAATGGTGTGATTCCATTAGAATACGCACTCTTCAAGCCTCTCCCTTCAAACAAAGAAGCTGTAGACTCCAATACTCTACTTCACTACTCCAATGTCTTTGATGCAGTGGTGGATGCAGCCTACTTTGCCATGTCCTTTTTGAACTACACTAACATTCCCGTGGTGGTAACAGAGTCAGGCTGGCCCTCAAAGGGTGATTCGAATGAGCCTGATGCTACAGTTGACAATGCTAATACTTATAACAGTAATTTGATCAAGCATGTGCTGAACAAAACAGGGACTCCAAAACATCCTGGGATTGCTGTTAGTACATACATCTATGAGCTGTACAATGAGGATACGAAGCCCGGGCCAGTGTCAGAGAAGAACTGGGGATTGTTTGATGCAAATGGGGAACCTATTTATATTTTGCACTTGACAGGATCAGGAGCAGTTTTGGCTAATGATACCACTAATCAAACTTTTTGTATTGCAAAAGAAGGTGCTGACCCTAAGATGGTGCAGGCTGCACTAGATTGGGCTTGTGGACCTGGGAAAGTGGATTGCTCTGACTTGCTTCAGGGACAACCTTGCTATGAACCAGACAACGTGATTGCTCATGCAACTTTTGCTTTTGACGCATACTATACTAAGATGGGGAAGTCTCCTGAGGCATGTGATTTCAATGGAGTGGCTACAGTCTCTACCACAGATCCAAGTCATGGTTCGTGTATATTTCCAGGAAGTCTTGGCAAGAATGGCACCTTCTCAAACATAACAGCACCATCAATGAATTCCACAAGTTCAGATTCTTCTGCCAGCAATTTCCGCACCTGTGAACTGAGAATCAGAAGCATTATAATGGTGATAGGATTTTTAGTATGGGGGCTGGTTTTGTAA 1494 0.4471 MALHLLLLLLTVLAAAADNEPFIGVNIGTDLSDMPHPTQVVALLKAQQIRHVRLYDADQAMLIALSKSGIEVVVSVPNEELLAIGQSNSTAANWVSRNVVAHYPATNITTICVGSEVLTTLPNAAKVLVNAIKYIHSALVATNLDRQIKVSTPLPSTIILDSFPPSQAFFNRSMNSILVPLLDFLQSTDSYLMLNVYPYYDYMKSNGVIPLEYALFKPLPSNKEAVDSNTLLHYSNVFDAVVDAAYFAMSFLNYTNIPVVVTESGWPSKGDSNEPDATVDNANTYNSNLIKHVLNKTGTPKHPGIAVSTYIYELYNEDTKPGPVSEKNWGLFDANGEPIYILHLTGSGAVLANDTTNQTFCIAKEGADPKMVQAALDWACGPGKVDCSDLLQGQPCYEPDNVIAHATFAFDAYYTKMGKSPEACDFNGVATVSTTDPSHGSCIFPGSLGKNGTFSNITAPSMNSTSSDSSASNFRTCELRIRSIIMVIGFLVWGLVL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g2043 497 ProSitePatterns Glycosyl hydrolases family 17 signature. 257 270 IPR000490 GO:0004553|GO:0005975
Prci2g2043 497 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 10 432 IPR044965 GO:0004553|GO:0005975
Prci2g2043 497 Gene3D - 353 445 - -
Prci2g2043 497 SMART X8_cls 359 444 IPR012946 -
Prci2g2043 497 FunFam Glucan endo-1,3-beta-glucosidase 4 354 448 - -
Prci2g2043 497 FunFam Glucan endo-1,3-beta-glucosidase 3 22 347 - -
Prci2g2043 497 Pfam X8 domain 360 431 IPR012946 -
Prci2g2043 497 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Prci2g2043 497 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Prci2g2043 497 Gene3D Glycosidases 22 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g2043 Prci-Chr2 15540257 15543507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g2043 17 474 Glycoside Hydrolase AT1G66250 73.913 0.0 732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g2043 2 15540257 15543507 Prci2g2043 2 15540257 15543507 CCT
Prci2g2043 2 15540257 15543507 Prci2g2043 2 15540257 15543507 ECH