Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0145 ATGGCAGCTAACGACGATATAGAGGAAATTTCTGCTGAGAATTCTGTTTATTCACCGGCTTCGACCTCACCAATGGGTAGCAGATGCAGACTTGTGTTTGATAGACTATGGGCTTTTACCTCTTCTTGGAAGAGAAGCGGCGCACCGCGTGGTCGAAGAATTTTCCACAGAGATGTCGAGAAAGAAGAATTCCAGTATGCTAGTACTCAATGCCTCTCTTCTTACTACAGTGTGTTCGTGGTTCGCCTAGCAATCATGGTCATGCTAGCCATCTTGATTGGGCTGCTCACTATATTAACATGGCATTTCACGAAGAGTTATACGGCAAAATCACTTGATAACTTAGCATATGGGCTTCGTTATGAATTACTGCAACGTCCCATCTTACGGATGTGGAATATTTTGAATTCTACTGCTGAAATTACAAAAGCTCAGGTTGAGCTGTCTGAATATGTAATCAGACGATACAGCAACCCCGCCAATCAAGCAGAACAAGTTGAGCAGCTGTACGAAGCTATGAGGTCTGTAACCTGGGCCCTCTTTTCCAGTCGCAAGGCACTCAATTCAATAACGATCAATTACAGGAATGGCTTTGTTCAGGCATTCCACAGAGATCTTAAGGATAACAATACATTTTACATCTACTCTGATCTTGCAAACTACTCTATAGGTGCCAGTGCCGCTAATGAGATGAAATCACTCTCAACACATCAAGCTTGGAACGATGAAGCCATTCGTGGTAACAGTTCTGCAAATTGGTATCGTGAACCACTTGACCCTCTTAGTGGTGAGAAGATTGGAAAAGCTAAGAAGATTGCACCAGAAGACTTGATTAATATTGCTGGCCTTTCTCAAGTCCCTGATGGGGCAGCTTCATGGCATGTTGCTGTGAGCAAGTTTACGGATTCACCATTGCTTTCTGCGGCGCTGCCAGTTTGGGACTCTTCTAATAAGAGCATTGTGGCAGTTGTGGGTGTCACTACCGCACTTTATAGTGTTGGGCAGCTAATGAAAGAACTAGTTGAATTTCATAGTGGTTATATCTATTTGACCTCCCTAGAGGGTTACTTACTTGCCACTTCCACTAATGCTCCACTGCTGACATACTCAAAGCCTCTCAAGCTTAAGATGGCTGTTGATTGTGAAGATGATGTGATACGATTGGGAGCCCAGTGGCTAAAGAGAACCTATGGGAAGAATTTTCCTCCAAGTCATGGGGTTCACGTCGAGAATGTTGAGCTAGGTCGTCAGCAATATTACATCGACTCATTCTTTCTAAATTTGAAGAGGCTTCCTCTGGTGGGTGTTATCATTATTCCAAGAAAGTATATTATGGGGAAGGTTGATCAAAGAGCCTTCAAAACATTGGTTATTCTGATATCTGCATCGTTGTGTATTCTAGTCATTGGATGTGTTTGCATTTTAATTCTGACAAACGGGGTATCAAAGGAAATGAAACTAAGAGCAGAACTAATCAGTCATCTGGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGTCAGTTTCTTGCAAACATGAGTCATGAATTGAGGACACCTATGGCAGCAGTGATTGGGTTGCTTGACATTCTTATATCTGATGATTGTCTTACAAATGAACAATATGCAACAGTTTCTCAGATCAGAAAATGCTCAACTGCCTTACTCCGTCTTCTTAACAACATATTGGATCTCAGCAAGGTGGAATCTGGAAAATTGGTGTTAGAAAATGCAGAATTTGACTTGGGACGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTGCAATGCATTAACCACAACGTAGAGACTGTTTTGGACCTATCAGATGATATGCCAAAGGTAGTTCAAGGTGATTCTGCTAGGGTTGTTCAAATTTTCGCAAATTTGATCAACAATTCAATTAAGTTTACTCCATCTGGTCACATTATTCTTCGAGGATGGTGCGAGAACCCAAATTGTTCCAGTGATAGCCCAATTCTTCCTCTTAATCAGAAGTCCCGGACTCCACAAAAGACCAGAATGAAGCAACAAGAAAACCATGCAAAGAAGGCATCTAAAAAAGACAGCCAAATAATTCTTTGGTTTGAAGTAGATGACACAGGCTGTGGTATTGATCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCAGATCCATCAACCACCAGGCTGCATGGAGGCACCGGTCTTGGGCTTTGCATTGTGAGAACCTTGGTCAATAAAATGGGTGGAGAAATCAAGGTTGTCAAAAAGGAAGGCCCAGGAACCTTAATGCGGTTGTACCTGCTTCTCACTACACCCATGGATGCCACAGAACAACATTGTCAAATAGGTTATGCGGAGAGTGGCTTAGTGGTATTGCTTGCACTACATGGAGACACGAGTCGGTCTATCACATCTAGTTGGTTACAGAAAAATGGGGTTTGCACTCTGCAGGCATCTGAATGGAATGAACTGACACAAATTCTTAGGGAACTCTTCCATGCAAGTTCAGTCCAAAATAATGGCTTTGATGCACATTATGCAGTAAATAAGAGTTGGAAGTCCAAATTACTCAACATAGAAGAAATGAGGAACCCAGCATTTGTCATTATAGTGGACATAGGGCTGCTTGATTTGAGCACAGATATATGGAAGGAACAGCTCAACTTCCTTCACAAGTACTTTGGGAGAACAAAGTTCGCATGGGTGCTAAGTCACGATACCTCTAATACCATAAAGATGGAGCTTCGCAGGATGGGGCATATATTGATGGTCAACAAGCCCCTCTACAAAACCAAAATGTTTCATATTCTGGAAGCTGTCATAAAGGAGAGAAATATTGAGCTGCAAAAGAAAATTTTGACTGCTTCGAGAACCACAACGAAAGAGGATGATGCACACGAGTTTCTGGAGATTGATTCTACTCATTTTGATGGTGTTAGCTCTGATGGTTCTGACATATCCGAAAACGGTGCTTCTAATAGTGCCAATGTTGCTAAACAAAGGGAAAAAATTGTAAAATCCCATCCACCATCACAGTACAACATAAACAACTGCTTAGTTGGATTAGCCAATGAATATGCGGAAGATAACATTTCAAGGAAAGAAGAATCATGTCAGAGCAGCCCCAGCTGCCGTGACATCCTGGAAGACATGGAACCAAAATTACAAGGACCCTTTCCAACAGAAGCTCAAGGAAAAGATTCTGATTCTGTGAAAACATTTAGTGTCACTTGCTCAAGTAAAACTGTTAATGGAAAGAAATCTCTTGAAGGTTTAAGGATATTGCTTGCAGAAGACACTCCAGTGCTTCAAAGAGTTGCAACCATAATGTTGGAAAAAATGGGAGCTACAGTTGTTGCTGTAGGTGATGGACAGCAGGCTGTGGATGCTCTGAATTGCATGCTCGGCGCTGAAGATAGTAGAAGGGAGTCTCTAATGAAGGAGAGAAGCACAATATCTCAAACAGAAATTTTCAGTTGTACGCCTTATGACTTGATTCTAATGGATTGTCAGATGCCGAAGATGGATGGTTATGAAGCCACGAAAGCAATCAGGAAATCAGAAGCAGGAACTGGCTCGCACATTCCCATAGTTGCTCTTACAGCCCATGCAATGTCATGTGATGAAGCTAAGTGCCTGGAGGTGGGCATGGATGCTTATTTAACAAAGCCAATTGACTTCAAGCTAATGGTGTCCACCATTCTTTCACTCACTAGAACAACATCCTGA 3729 0.4205 MAANDDIEEISAENSVYSPASTSPMGSRCRLVFDRLWAFTSSWKRSGAPRGRRIFHRDVEKEEFQYASTQCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKSYTAKSLDNLAYGLRYELLQRPILRMWNILNSTAEITKAQVELSEYVIRRYSNPANQAEQVEQLYEAMRSVTWALFSSRKALNSITINYRNGFVQAFHRDLKDNNTFYIYSDLANYSIGASAANEMKSLSTHQAWNDEAIRGNSSANWYREPLDPLSGEKIGKAKKIAPEDLINIAGLSQVPDGAASWHVAVSKFTDSPLLSAALPVWDSSNKSIVAVVGVTTALYSVGQLMKELVEFHSGYIYLTSLEGYLLATSTNAPLLTYSKPLKLKMAVDCEDDVIRLGAQWLKRTYGKNFPPSHGVHVENVELGRQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGKVDQRAFKTLVILISASLCILVIGCVCILILTNGVSKEMKLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYATVSQIRKCSTALLRLLNNILDLSKVESGKLVLENAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKVVQGDSARVVQIFANLINNSIKFTPSGHIILRGWCENPNCSSDSPILPLNQKSRTPQKTRMKQQENHAKKASKKDSQIILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRTLVNKMGGEIKVVKKEGPGTLMRLYLLLTTPMDATEQHCQIGYAESGLVVLLALHGDTSRSITSSWLQKNGVCTLQASEWNELTQILRELFHASSVQNNGFDAHYAVNKSWKSKLLNIEEMRNPAFVIIVDIGLLDLSTDIWKEQLNFLHKYFGRTKFAWVLSHDTSNTIKMELRRMGHILMVNKPLYKTKMFHILEAVIKERNIELQKKILTASRTTTKEDDAHEFLEIDSTHFDGVSSDGSDISENGASNSANVAKQREKIVKSHPPSQYNINNCLVGLANEYAEDNISRKEESCQSSPSCRDILEDMEPKLQGPFPTEAQGKDSDSVKTFSVTCSSKTVNGKKSLEGLRILLAEDTPVLQRVATIMLEKMGATVVAVGDGQQAVDALNCMLGAEDSRRESLMKERSTISQTEIFSCTPYDLILMDCQMPKMDGYEATKAIRKSEAGTGSHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMVSTILSLTRTTS 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0145 1242 SMART REC_2 1092 1234 IPR001789 GO:0000160
Prci10g0145 1242 Gene3D - 495 574 - -
Prci10g0145 1242 Gene3D - 575 773 IPR036890 -
Prci10g0145 1242 ProSiteProfiles Histidine kinase domain profile. 514 771 IPR005467 -
Prci10g0145 1242 CDD REC_hyHK_CKI1_RcsC-like 1094 1234 - -
Prci10g0145 1242 MobiDBLite consensus disorder prediction 661 688 - -
Prci10g0145 1242 MobiDBLite consensus disorder prediction 674 688 - -
Prci10g0145 1242 ProSiteProfiles Response regulatory domain profile. 1093 1238 IPR001789 GO:0000160
Prci10g0145 1242 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 562 767 IPR036890 -
Prci10g0145 1242 PRINTS Bacterial sensor protein C-terminal signature 714 724 IPR004358 GO:0016310|GO:0016772
Prci10g0145 1242 PRINTS Bacterial sensor protein C-terminal signature 696 710 IPR004358 GO:0016310|GO:0016772
Prci10g0145 1242 PRINTS Bacterial sensor protein C-terminal signature 731 749 IPR004358 GO:0016310|GO:0016772
Prci10g0145 1242 SMART HKATPase_4 620 771 IPR003594 -
Prci10g0145 1242 PANTHER TWO-COMPONENT HISTIDINE KINASE 64 779 - -
Prci10g0145 1242 Pfam Response regulator receiver domain 1094 1233 IPR001789 GO:0000160
Prci10g0145 1242 CDD HisKA 508 569 IPR003661 GO:0000155|GO:0007165
Prci10g0145 1242 SUPERFAMILY CheY-like 1090 1239 IPR011006 -
Prci10g0145 1242 Pfam His Kinase A (phospho-acceptor) domain 508 573 IPR003661 GO:0000155|GO:0007165
Prci10g0145 1242 Gene3D - 1074 1239 - -
Prci10g0145 1242 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 620 770 IPR003594 -
Prci10g0145 1242 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 494 574 IPR036097 GO:0000155|GO:0007165
Prci10g0145 1242 SMART HisKA_10 507 573 IPR003661 GO:0000155|GO:0007165
Prci10g0145 1242 FunFam Histidine kinase 1-like protein 495 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0145 Prci-Chr10 904111 911436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0145 23 1242 Histidine Kinase Gene Family AT2G17820 64.516 0.0 1566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci10g0145 HATPase_c 3e-22 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0145 10 904111 911436 Prci10g0145 10 904111 911436 ECH