Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01844 ATGAGGGAGGAAGAAATCGAGAAGCTCCGAGGTGTGGTGCGCGACTGCGTGAGCAAACACCTCTATTCCTCCGCCATCTTCTTCGCCGATAAAGTTGCCGCCTTCACCGCCGACCCCGCCGACATCTACATGCAGGCGCAGGCGCTCTTCCTTGGCCGCCACTACCGCCGTGCCTTCCACCTCCTCAATGCCTCCAAAATCGTTCTCAGCGACCTCCGATTCCGCTACCTCGCTGCCAAGTGCCTTGAGGAATTGAAGGAATGGGATCAGTGCCTGTCGATGCTGGGTGAGGCTAAAGTGGATGACGAAGGAAATGTTTATGATACGAAGGACTCGAATGTCATGTACTTGGATAAAGATTGTGAAGATCGTGAAATCAATATATCTTCTGCTATATGCTTCTTAAGAGGAAAAGCATACGAGGCTCTAGAAAACCGTGCCCAGGCTAGACTGTGGTATAAAGCTGCTATAAAAGCGGATCCTTTATGTTATGAGGCTTTGGAATGTCTTATTGAGAATCACATGCTTACTTGCCAGGAAGAAGCAAATTTGATATCGTCATTGCAATTTGGTAGTGAGGATGGATGGCTTTCTTCATTTTATTCTTGTTTGATAAAGAAGTATGACAAAGAAAATGTTGTAGAAGCCAAGTTCAGAGAACTTGAGAATGAAAGCTGTAAAAGTGACCAATCTGATACTTCTTTCTTGCGCTCACTGAAATCCAATACCGATCTATTGGCCTGCAAAGCTGAATACTACCATCAGTGTGGTGAATATCAGAAATGTTTTGACTTAACATATGTTTTGCTTGAGAAGGATCTTTTCCATCTGAAGTGTACGTTAGTACACTTGGCAGCTGCTGTTGAACTTGGGCATTCAAATGAACTCTATTTGATGGCATGCAATTTGGTGAAGGATTATCCTCAGATGGCTTTATCATGGTTTGCTGTTGGTTGCTACTACTATTGTATCAAGAAGTATGATCAATCCCGTCGTTATTTTAGCAAGGCAACTAGTCTAGATGGAACATTTCCCCCTGCATGGATAGGCTATGGGAATGCTTATGCTGCTCAAGAAGAGGGTGATCAGGCTATGTCAGCTTACCGCACTGCAGCTAGATTGTTTCCTGGGTGCCACTTACCAACTCTTTACATTGGAATGGAATGCATGCGTACCCACAGCTATAAGCTAGCTGAGCAGTTTTTTATACAGGCCAAGTCAACTTGCCCCTCAGATCCACTTGTGTATAATGAACTTGGAGTTGTTGCCTATCATATGAAAGAGTACAAGAAAGCTGTCTGGTGGTTTGAGAAAACATTAGCATTGATACCAACTGCTTTATCTGAAATGTGGGAATCGACTGTAGTCAATCTTGCCCATGCATACAGAAAACTGAAGATGTATGGAGAAGCAATTTCGTACTATGAGAAGGCACTTGCATTATCAACGAGAAGTGTGAGCACTTATGCTGGTCTTGCATATACTTATCACTTACAGGACGATTTCACTACAGCAATAACATATTATCACAAAGCCTTGTGGCTGAAACCAGATGATCAGTTCTGCACTGAGATGTTAAGTTGGGCTCTAATAGATGAAAAGTCAAAGGGGCTTTGA 1617 0.4341 MREEEIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTADPADIYMQAQALFLGRHYRRAFHLLNASKIVLSDLRFRYLAAKCLEELKEWDQCLSMLGEAKVDDEGNVYDTKDSNVMYLDKDCEDREINISSAICFLRGKAYEALENRAQARLWYKAAIKADPLCYEALECLIENHMLTCQEEANLISSLQFGSEDGWLSSFYSCLIKKYDKENVVEAKFRELENESCKSDQSDTSFLRSLKSNTDLLACKAEYYHQCGEYQKCFDLTYVLLEKDLFHLKCTLVHLAAAVELGHSNELYLMACNLVKDYPQMALSWFAVGCYYYCIKKYDQSRRYFSKATSLDGTFPPAWIGYGNAYAAQEEGDQAMSAYRTAARLFPGCHLPTLYIGMECMRTHSYKLAEQFFIQAKSTCPSDPLVYNELGVVAYHMKEYKKAVWWFEKTLALIPTALSEMWESTVVNLAHAYRKLKMYGEAISYYEKALALSTRSVSTYAGLAYTYHLQDDFTTAITYYHKALWLKPDDQFCTEMLSWALIDEKSKGL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01844 538 ProSiteProfiles TPR repeat profile. 452 485 IPR019734 GO:0005515
Phco9g01844 538 ProSiteProfiles TPR repeat profile. 413 446 IPR019734 GO:0005515
Phco9g01844 538 ProSiteProfiles TPR repeat profile. 486 519 IPR019734 GO:0005515
Phco9g01844 538 Pfam Tetratricopeptide repeat 319 377 - -
Phco9g01844 538 ProSiteProfiles TPR repeat profile. 345 378 IPR019734 GO:0005515
Phco9g01844 538 Pfam Tetratricopeptide repeat 415 482 - -
Phco9g01844 538 PANTHER CELL DIVISION CYCLE 16,23,27 22 523 - -
Phco9g01844 538 Pfam Tetratricopeptide repeat 132 161 IPR019734 GO:0005515
Phco9g01844 538 SUPERFAMILY TPR-like 41 174 IPR011990 GO:0005515
Phco9g01844 538 ProSiteProfiles TPR repeat profile. 311 344 IPR019734 GO:0005515
Phco9g01844 538 Pfam Anaphase-promoting complex, cyclosome, subunit 3 19 97 - -
Phco9g01844 538 Pfam Tetratricopeptide repeat 491 510 IPR011716 -
Phco9g01844 538 Gene3D Tetratricopeptide repeat domain 5 532 IPR011990 GO:0005515
Phco9g01844 538 SUPERFAMILY HCP-like 313 520 - -
Phco9g01844 538 SMART tpr_5 345 378 IPR019734 GO:0005515
Phco9g01844 538 SMART tpr_5 379 412 IPR019734 GO:0005515
Phco9g01844 538 SMART tpr_5 130 163 IPR019734 GO:0005515
Phco9g01844 538 SMART tpr_5 452 485 IPR019734 GO:0005515
Phco9g01844 538 SMART tpr_5 413 446 IPR019734 GO:0005515
Phco9g01844 538 SMART tpr_5 311 344 IPR019734 GO:0005515
Phco9g01844 538 SMART tpr_5 486 519 IPR019734 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01844 9 42858277 42867786 Phco9g01844 9 42858277 42867786 ECH