Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01718 ATGTCAGATGAGCAGTTTCAAGCGAGTGGAAACTGGTGGGAATCAGCGAGAAACGTGAGGTTTGAGAGTGGGGAAACACAGTCTTCTTCTTCGGGGCTAACCAACATGGGAAACTATGCTTGGCAGCATGAAATGGCTAGGTCTTCTTCCATGGATAACTCTGCCTCAGGAGGTTCCTCTGTGGTTTTCCATGACCAGAAGCAGCTTCAAGTTCAGCCACATCATGACTCAACAGCCACAAATCCCACCAATGACCATCCCAACTTGCACATGATGGGTTTGGGCCTCTCATCCCAAGCCATGGACTGGAATCAAGCATCTTTGCAGCTGCGAGGTGAGAAGGGTTCGGAGGGCAGTTTCAGGTCGATGTTGCAAGAGAATTTGAGCTCACCAGGCACCACTTTTCAGCAAGAAAGTGGGAATAACAATATTGCCTTGTCTCATCATCAACAAGTTCATTGGAGGCCAGAAAAGTTGTTCTCTGCGGAGTCATCAAGCAATGAATTCAAGAGGGGTTTCTCCTTGGACCAAACACAGTTCAGTCCTCAATACAGCTCTGGGGACAGCACTGTCACAAGCCAAGGTTTGCCTTGTACTTTTCAGATGGATTATGTGGGTAACCCTTCTTCAATATTGCAAGGTCTTTTGGGACATGAGAGCGATAACCAACAACCCCACCAAGGTGGTAGTGCTTCCTTTGAGAATCGTCCCATGAATTTTCCTTACTCAGCAACAACCTATGGATTAAGCTCAAACATTGAGTTAGTTCCTTCTTGGTCAAAGGTGCCTCAGTTCTTAAGAGCTTCACCGCCAAAACAACCACCCAATAACCAGTTGCATTTCACCAACAACGCTCCCTTTTGGAACGCTAATTCTGAGCCTTCTATGAAGGATGCTCGATCCAGCTTCATCTCCTCTTTGCAACCACCCTTTTCGCCATCAAATTTCGATGTTCAATCAAAGAATATATCTGAAGTTAGGGATTCGGGTGTGGTGAAGAAAAGTGGAAGTGAAACAGCACCAAAAAGGCCCAGAAACGAAAACCCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTTTCACCTTTCGGAAAGACTGATACAGCGTCAGTGCTCTCTGAAGCCATTGAATATATCAAATTCCTCCATGAACAAGTCACCGTTTTAAGCACTCCCTATATGAAAACTGGTGCTCCCATACACCATCAGCAGAGTTCTGGTAAATCGAAGGAATGTGAGGGTCCAAAGCAAGATCTTAGAAGCCGAGGGCTATGTTTGGTGCCAGTTTCTAGTACATTTCCAGTGACTCATGAACCCACAGTTGAATATTGGACACCAACATTTGGAGGAACTTACAGATAG 1401 0.4568 MSDEQFQASGNWWESARNVRFESGETQSSSSGLTNMGNYAWQHEMARSSSMDNSASGGSSVVFHDQKQLQVQPHHDSTATNPTNDHPNLHMMGLGLSSQAMDWNQASLQLRGEKGSEGSFRSMLQENLSSPGTTFQQESGNNNIALSHHQQVHWRPEKLFSAESSSNEFKRGFSLDQTQFSPQYSSGDSTVTSQGLPCTFQMDYVGNPSSILQGLLGHESDNQQPHQGGSASFENRPMNFPYSATTYGLSSNIELVPSWSKVPQFLRASPPKQPPNNQLHFTNNAPFWNANSEPSMKDARSSFISSLQPPFSPSNFDVQSKNISEVRDSGVVKKSGSETAPKRPRNENPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKTGAPIHHQQSSGKSKECEGPKQDLRSRGLCLVPVSSTFPVTHEPTVEYWTPTFGGTYR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01718 466 CDD bHLH_AtbHLH_like 352 403 IPR045239 -
Phco9g01718 466 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 346 395 IPR011598 GO:0046983
Phco9g01718 466 MobiDBLite consensus disorder prediction 323 354 - -
Phco9g01718 466 SMART finulus 357 401 IPR011598 GO:0046983
Phco9g01718 466 FunFam Transcription factor bHLH123 family 356 418 - -
Phco9g01718 466 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 356 413 IPR036638 GO:0046983
Phco9g01718 466 MobiDBLite consensus disorder prediction 216 236 - -
Phco9g01718 466 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 142 447 - -
Phco9g01718 466 Gene3D - 356 417 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01718 Phco-Chr9 40480986 40484207 Dispersed/Transposed