Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00713 ATGGAGTACCCAAACTTCTTTGGTGAAGACGAGGGCATAGCCCATCTCACAGACTCGCTTGCTTTTCCAACCATGGATCCTTCTTCCAGAGACCCTTCGCTGGAAGACAACGACTTCTCAGAAACTGCCAAGTTCATCAGCCAGATCCTCATGGAAGAGAACGTCGAACACAAGCCATTCTACGACTCACTCACCTTGCAAGTTACCGAGAAATCCTTCTACGACGCTCTCGCCGGTAACCTACTTCCTTCCTCCAATCAACAACCCCTTGCTTTCAGTCCCGAAGCTGAAACCACCACCACCACCACCAACGCTAGCAGCAGTAGCAGCAGCAACAACAGTAACAACAATTTTTCAGATGAAAATTCTAGTGAGTTGAAGCTTCCTTCTCCAGATTCTGTTTTTAAGTTTAACTCCCGCCCACTTTCTCAACCATCTCCTTCAATTAACGCCAATCATGGGCTCCCAGATTTGGACTTTTCTATTGCCAAACTCTTGTCACAGAATATTTTCAATGATGTTGACTCCGTTTCCCAGTTCAGGCGAGGCTTGGAGGAAGCTAGCAAGTTTCTTCCTCCGGGACCTAACCTTGTGACTGGTCTAGATTCAAATGGAGAACAAGCGTTCTATAAGTTTGGAGAGACTTCGTATGGGTTGAGGAGTGGGAAAAATCACAAGCGGGATGAGAGATACGCTATAGAAGAAGAAGAAGAAGAAGAAGAAGGGAGAAGTAACAAGCAGTCAGCACTTTCCCATGTCGATGAGAGTGACTTGTCTGATGCTTTTGATCGGGTGTTGCTTCATGAAGGAAACATGTGTAGCGAAATCAGTTCTTTGCCAGGTGGAGCAGTGAAGGTTGAGGAACTAGATGGAGGGAAGAGTCGTTCAAGGAAACCAGGGAGGAACAAGGAAACAGTTGATTTGAGGAATCTTTTGTTGATGTGCTCACAATCCGTGTATGCCAATGACAACAGGACTGCCAGTGAATTGCTAAAGCAGATTAGGCAACACTCTTCTCCCTTTGGGGATGCATCACAGAGGTTGGCTCATTACTTTGCCAATGCCCTTGAGGCACGCTTGGTTGGGGAGGGTACTGTTGCACAAGGAACTTATTTTTTTCTGACCTCTAAGAGGATCTGTGCTGCTGAGTTTCTCAAGGCTTACCAGGTTTTCCTTTCCGCCTCCCCTTTCAAGAAGTTTACATATTTCTTTGCGAATAAAATGATTATGAAAGCAGCTGCAAAGGCAGAAACCATCCATATTATTGATTTTGGCATCCTTTATGGTTTCCACTGGCCAATTCTTATTAAGTTTTTATCAAATAGAGAGGGTGGTCCTCCCAAACTGAGGATCACAGGGATAGAGTTTCCCCAACCTGGCTTTCGCCCCACAGAAAGAATTGAGGAGACTGGTTCCCGTCTGGCTAACTACTGTAAGCGTTACAATGTTCCCTTTGAGTACAATGCCATAGCATCGAGGAATTGGGAAACAATTCAGGTTGAAGCCCTTAAAATTCAGAGCAATGAGCTAGTTGCTGTCAATTGTCATATGAGGTTTGAGAATTTACTGGATGAGTCTATTGAAGTGAAAAGTCCTAGAAATGCAGTCTTGCATTTGATCAGGAAGATAAATCCAGATATTTTTACTCAGTCCATCACTAATGGATCATATAATGCCCCCTTCTTTGCCACAAGGTTTAGGGAGGCTTTGTTTCATTATTCTGCTATTTATGATATGTGTGACACTGTCATACCTCGTGAAAACGAATGGAGGTTGATGATTGAGAGAGAGCTTTTGGGTCGGGAGGCTATGAATGTTATAGCTTGCGAAGGTTCTGAGAGACTTGAGAGGCCCGAGACATACAAACAGTGGCAGGCTAGGAATACAAGGGCTGGTTTCAAGCAGCTCCCATTGAATAAGGAATTGATGGCCAAATTTAGGACCAAGTTAAAGGAATGGTACCACAGAGATTTTGTCTTTGATGAAGATAACAATTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTATGCTTCCACTTACTCAAGGTTTTGGTACCTACTTGCTTCACCTTCAGATGATGTGATGAAGATTGTATACCAAAATTTGCACCGTGTTGCTTGGTAA 2127 0.441 MEYPNFFGEDEGIAHLTDSLAFPTMDPSSRDPSLEDNDFSETAKFISQILMEENVEHKPFYDSLTLQVTEKSFYDALAGNLLPSSNQQPLAFSPEAETTTTTTNASSSSSSNNSNNNFSDENSSELKLPSPDSVFKFNSRPLSQPSPSINANHGLPDLDFSIAKLLSQNIFNDVDSVSQFRRGLEEASKFLPPGPNLVTGLDSNGEQAFYKFGETSYGLRSGKNHKRDERYAIEEEEEEEEGRSNKQSALSHVDESDLSDAFDRVLLHEGNMCSEISSLPGGAVKVEELDGGKSRSRKPGRNKETVDLRNLLLMCSQSVYANDNRTASELLKQIRQHSSPFGDASQRLAHYFANALEARLVGEGTVAQGTYFFLTSKRICAAEFLKAYQVFLSASPFKKFTYFFANKMIMKAAAKAETIHIIDFGILYGFHWPILIKFLSNREGGPPKLRITGIEFPQPGFRPTERIEETGSRLANYCKRYNVPFEYNAIASRNWETIQVEALKIQSNELVAVNCHMRFENLLDESIEVKSPRNAVLHLIRKINPDIFTQSITNGSYNAPFFATRFREALFHYSAIYDMCDTVIPRENEWRLMIERELLGREAMNVIACEGSERLERPETYKQWQARNTRAGFKQLPLNKELMAKFRTKLKEWYHRDFVFDEDNNWMLQGWKGRILYASTYSRFWYLLASPSDDVMKIVYQNLHRVAW 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00713 708 MobiDBLite consensus disorder prediction 136 150 - -
Phco9g00713 708 MobiDBLite consensus disorder prediction 221 255 - -
Phco9g00713 708 ProSiteProfiles GRAS family profile. 299 683 IPR005202 -
Phco9g00713 708 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 233 678 IPR005202 -
Phco9g00713 708 Pfam GRAS domain family 308 679 IPR005202 -
Phco9g00713 708 MobiDBLite consensus disorder prediction 85 150 - -
Phco9g00713 708 MobiDBLite consensus disorder prediction 85 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00713 Phco-Chr9 5269819 5272152 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco9g00713 GRAS 1.4e-112 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01648 10 39152932 39155094 Phco9g00713 9 5269819 5272152 PCT
Phco9g00713 9 5269819 5272152 Phco10g01647 10 39144665 39145573 PCT