Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00712 ATGGAGCACAACTTTCCCAGAGTTGACCTGTTTGACGAAGAGGAGAGCATATCATACCTCTCACACTCACTAGGTTTTGCAACAACGGATCCTCCATTGGAAGACAACGACTTCTCAGAAACTGCCAAGTTCATAAGCCAGATCCTCATGGAAGAGAACGTTCAACAAAATCCATTCTATGACCCGCTCACCTTGCAGGTTACCGAGAAGTCCTTCTATGATACTCTCATTGGTAACATTTCCCCTAATCAACACGCCCTTGTTCTCAGCCCCCAAGGTGAAACCGCCACCAGCAGCAGCAATAACTACAACAGCAGTTTTTTAGATGAAAATTTTCCTTCCCCAGATTCTGTTTCTGTTTCTGCTTCTGCTTTTCAGTTTAACCCCCACATCCTTTCTCAACCACCTTCAGTTACTGTTAGTCATGGATTCCAAGATTTGGATTCTTCTACTGCCAAATTCTTGGTGCAGAATATGTTCAATGATGCTGATTCTGTTTCCCAGTTTAGGAGAGGGTTAGAGGAAGCTACCAAGTTTCTTCCTTCTGGCCCTAAGCTTGTAACTGGTCTGCATTCAAACGGGGAGGAACAGGTCAATACGTTTGGAGATAATTCCTACGGATGGGAGGGAAGGAAGAATCACGAGCGACAAGAGATAGAAGAAGAAGAAGGGAGAAGGAGTAAGCAATCGGCACTTAGCCTTGTTGATGAGAGTGACATTTCAGATGCTATTGATCGGGTGTTTCTAAGTGTGGAAAACGTGGGTAGTGAACAGAATACCTTGCAGAATGGAGCAGTGAAAGGTGAGGAGCGAGGTGGAGGGAAGAGCCGATCAAAGAAACAAGGGAGGAAGAAGGAAAGTGTGGATTTGAGGAATCTTCTGCTGATGTGTGCACAATCTGTGTATGCCAATGACAACAGAGCTGCCAGTGAATTACTAAAGCAGATTAGGCAACACTCTTCTCCCTTTGGGGATGCATCACAGAGGGTAGCTCACTATTTCGCCAATGGTCTTGAAGCACGCTTGGTTGGGACTGGTTCAGGCGCTCATGAAATATTTTCTTTTCTGAACTCTAAGAGCATTACTGCTGCTGAGTTCCTGAGGGCATACCAACTTATTCTATCTTCCACCCCTTTCAAGAAGTTTACATATTTCTTTGCAAATAAAATGATTATGGAAGCAGCTGCAAAATCAGAAACCGTTCATATTATTGATTTTGGCATCCTATATGGTTTCCAGTGGCCAATTCTTATAAAGTTTTTATCAAACAGAGAGGGTGGTCCTCCCAAGCTGAGGATCACAGGGATAGAGTTTCCCCAACCAGGCTTTCGTCCCACTGAAAAAATTGAGGAGACTGGTCACCGTCTTGCTAGCTATTGTAAGCGTTACAAGGTTCCCTTCGAATACCATGCCATAGCATCAAGGAACTGGGAAACCATTCAGGTGGAAGCCCTTAAAATTGAGAGCAATGAGATAGTTGCTGTCAACTGTCACATGAGGTTTGAACATTTACTGGATGAGAGTACTGTTGAATTGAACAGTCCTAGAAATGCAGTACTACATTTGATCAGGAAGATAAATCCGGATATCTTTACTCAGATCATTATTAACGGATCATTTAGTGCCCCTTTCTTTAACACACGGTTTAGGGAGGCTCTATTCCATTATTCTGCTGTTTATGATATGTTTGACACTGTCATACCTCGTGAAAACGATTGGAGGTTGACGATTGAGAGAGAGCTTTTGGGTCGGGAGGCTGTGAATGTTATAGCATGTGAAGGTTCTGACAGGGTTCAGAGACCTGAGACATACAAACAATGGCAAGTTAGGAATACAAGGGCTGGTTTCAAGCAGCTCCCATTGAAGGAGGAATTAATGGCCAAATTTAGGACTAAGTTAAAGGAATATCACAGAGATTTTATCTTCAGTGAAGATAACAACTGGATGATTCAAGGTTGGAAGGGCCGCATTTTTAATGCTTCCACTTGTTGGGTGCCCACATAA 2004 0.4331 MEHNFPRVDLFDEEESISYLSHSLGFATTDPPLEDNDFSETAKFISQILMEENVQQNPFYDPLTLQVTEKSFYDTLIGNISPNQHALVLSPQGETATSSSNNYNSSFLDENFPSPDSVSVSASAFQFNPHILSQPPSVTVSHGFQDLDSSTAKFLVQNMFNDADSVSQFRRGLEEATKFLPSGPKLVTGLHSNGEEQVNTFGDNSYGWEGRKNHERQEIEEEEGRRSKQSALSLVDESDISDAIDRVFLSVENVGSEQNTLQNGAVKGEERGGGKSRSKKQGRKKESVDLRNLLLMCAQSVYANDNRAASELLKQIRQHSSPFGDASQRVAHYFANGLEARLVGTGSGAHEIFSFLNSKSITAAEFLRAYQLILSSTPFKKFTYFFANKMIMEAAAKSETVHIIDFGILYGFQWPILIKFLSNREGGPPKLRITGIEFPQPGFRPTEKIEETGHRLASYCKRYKVPFEYHAIASRNWETIQVEALKIESNEIVAVNCHMRFEHLLDESTVELNSPRNAVLHLIRKINPDIFTQIIINGSFSAPFFNTRFREALFHYSAVYDMFDTVIPRENDWRLTIERELLGREAVNVIACEGSDRVQRPETYKQWQVRNTRAGFKQLPLKEELMAKFRTKLKEYHRDFIFSEDNNWMIQGWKGRIFNASTCWVPT 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00712 667 MobiDBLite consensus disorder prediction 270 285 - -
Phco9g00712 667 Pfam GRAS domain family 290 664 IPR005202 -
Phco9g00712 667 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 230 654 IPR005202 -
Phco9g00712 667 ProSiteProfiles GRAS family profile. 281 665 IPR005202 -
Phco9g00712 667 MobiDBLite consensus disorder prediction 259 285 - -
Phco9g00712 667 MobiDBLite consensus disorder prediction 208 232 - -
Phco9g00712 667 MobiDBLite consensus disorder prediction 199 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00712 Phco-Chr9 5260439 5262442 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco9g00712 GRAS 9.7e-113 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00712 9 5260439 5262442 Phco9g00712 9 5260439 5262442 ECH
Phco9g00712 9 5260439 5262442 Phco10g01648 10 39152932 39155094 PCT