Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03285 ATGACGCTATGGATTAAGGCCACGGGAGCGTTGAAGGATAGGTACAGCATTTGGGTGGCCAAGCTCTTACCGAGTGGCCCATGTAGGAACCCTGATCTTGAAATGGTGATCATCAAGGCCACAAGCCACGATGAACAATGCATGGATTACAAGAACGTTCAGAGGGTTTTCAAATGGCTACGCACCTCACCATTGTACCTTCAGCCTCTTCTCTACACTCTTTCAATAAGGATGGAAAAGACTCGTTCGTGGGTGGTGGCACTCAAGGGGTTGATGCTCATTCATGGGGTGTTTTGTTTTGATCTTCCCGCGGTGCAGAAGATGGGAAGGTTACCGTTTGATTTGTCACTGTTTAGCGATGCATACATAAACCCTAACAGGGCCTGGGTTTACAACGCGTTTGTTAGGTCTTATTTCTTGTATTTGGACCAGAAATCAGCGTTTGTGAGGGTGGAAGCAACGAGAGAGACCAAGAGTGGAGGCAAGGAGAAGGAAGAGAGCGTGATGGAAGAACTGCAAAGCTTGGAGAAGCTGCTTGGTTTGATCGATTTGCTTCTGCAAATCAAGCCTAGGAGCCCTAACATGAACGTGGTGCTTGTTCTTGAGGCCATGGATTGTGTCATGGACGAGGTTTTGGAAATGTATGGAAAGTTTTCAACTAGGGTTCATCGAGCTGTGTCGAGGATACTTGACATGGGTGGGAAAGAGGAAGCTATGAGTGGTCTGGATGTTGTGAGAAAAGCTGAATTGCAAGGGGCTAAGATGACTACATACTTCAACTTCTGTAAGGACATTGGGGTCCTTAATGTTTCTGACTGCCCTGAAATTGTGAGGGTGGATGAGAAAGACATTGATGAACTAAAAAGAATCAGAGAGGGAAGAACGATGGAGAGTAATGAAAGTGATGATGAGAAGAATGATGTTGTGGCACATGAGGATAGTAATTGTAGAGCCATTGTGACCATTCCTGAGACGAAGCAAATGGGTTTGAAGACTGTGATCACTAACCAATGGGAAGTGTTTGATGATGATTTAATAGTCATGGAAGGTGCAAGTGTGCCCGTGGCCACAACAAATAACCCTTTTCTTGATTATTCTTTGAGCCTAGTACCCTATGTTCCCGTTTCCAACAATGTTCTTCCGGATTTAATTATTTTGTAG 1161 0.4488 MTLWIKATGALKDRYSIWVAKLLPSGPCRNPDLEMVIIKATSHDEQCMDYKNVQRVFKWLRTSPLYLQPLLYTLSIRMEKTRSWVVALKGLMLIHGVFCFDLPAVQKMGRLPFDLSLFSDAYINPNRAWVYNAFVRSYFLYLDQKSAFVRVEATRETKSGGKEKEESVMEELQSLEKLLGLIDLLLQIKPRSPNMNVVLVLEAMDCVMDEVLEMYGKFSTRVHRAVSRILDMGGKEEAMSGLDVVRKAELQGAKMTTYFNFCKDIGVLNVSDCPEIVRVDEKDIDELKRIREGRTMESNESDDEKNDVVAHEDSNCRAIVTIPETKQMGLKTVITNQWEVFDDDLIVMEGASVPVATTNNPFLDYSLSLVPYVPVSNNVLPDLIIL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03285 386 SUPERFAMILY GAT-like domain 164 289 - -
Phco8g03285 386 CDD ANTH_N_AP180_plant 33 148 - -
Phco8g03285 386 SUPERFAMILY ENTH/VHS domain 32 151 IPR008942 -
Phco8g03285 386 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 307 IPR045192 GO:0048268|GO:0072583
Phco8g03285 386 Gene3D - 5 153 IPR008942 -
Phco8g03285 386 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Phco8g03285 386 Pfam ANTH domain 32 287 IPR011417 GO:0005543
Phco8g03285 386 Gene3D ANTH domain 155 313 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Phco8g03285 386 FunFam Putative clathrin assembly protein 7 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03285 Phco-Chr8 47486823 47487983 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03285 8 47486823 47487983 Phco8g03285 8 47486823 47487983 ECH