Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03270 ATGGCTGCCACATTCTTCTCTCAACTGTCGCTTCTTCAATCCAACAACCTTTCTCCTTGTCGTATTTCTCCTCGCATCCCTCAATCTCTCGCCAGCCGTGTCAAAACCTCCTCCCTCGGGGTGGTTTCTGTGAGAAAAAGGGTAAGTGGGGTGGTGCCAAATGCTGCTCTGAATGCCTTGGAAACCAATTCGGATTTCCCCATTTCAGCTAAGAAGTCCATCAACCACCCCATTGTTGTTATCGATAACTATGACAGCTTTACCTATAATCTTTGCCAGTATATGGGAGAGTTAGGTTTTCACTTTGAGGTCTACCGCAATGATGAACTGACAGTGGAAGAGTTGAAAGGGAAAAATCCTAGAGGGGTGCTGATATCACCTGGGCCAGGGGAACCTCAAGATTCTGGCATATCTTTGCAAACAGTTTTGGAACTTGGACCAACTGTACCATTGTTTGGTGTGTGCATGGGTTTGCAGTGCATTGGTGAGGCTTATGGAGGAAAGATTGTTCGTTCTCCTTATGGTGTCATGCATGGAAAAAGTTCCTTGGTTTATTATGATGAGCAAGGAGAAGATGGAGTACTTGCTGGACTGTCAAATCCTTTCTTGGCTGGTAGATATCACAGCCTTGTGATTGAGAAAGAGAGTTTTCCTGATGAACTTGAGGCAACAGCCTGGACAGAAGATGGTCTTATAATGGCTGCTCGCCATAAGAAATATAAGCATCTACAGGGAGTTCAGTTTCATCCGGAGAGCATCATAACTCCAGAAGGGAAGAAAATTGTCCAAAATTTTGTCAAGCTTATTGAGAGAATGGAGGCTGGTGGTTCTTGA 834 0.4472 MAATFFSQLSLLQSNNLSPCRISPRIPQSLASRVKTSSLGVVSVRKRVSGVVPNAALNALETNSDFPISAKKSINHPIVVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTVEELKGKNPRGVLISPGPGEPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAYGGKIVRSPYGVMHGKSSLVYYDEQGEDGVLAGLSNPFLAGRYHSLVIEKESFPDELEATAWTEDGLIMAARHKKYKHLQGVQFHPESIITPEGKKIVQNFVKLIERMEAGGS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03270 277 CDD GATase1_Anthranilate_Synthase 78 266 IPR006221 -
Phco8g03270 277 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 77 275 - -
Phco8g03270 277 Pfam Glutamine amidotransferase class-I 79 266 IPR017926 -
Phco8g03270 277 NCBIfam glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 78 267 IPR006221 -
Phco8g03270 277 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 120 134 - -
Phco8g03270 277 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 150 166 - -
Phco8g03270 277 SUPERFAMILY Class I glutamine amidotransferase-like 77 271 IPR029062 -
Phco8g03270 277 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 69 273 - -
Phco8g03270 277 PRINTS Glutamine amidotransferase superfamily signature 123 132 - -
Phco8g03270 277 PRINTS Glutamine amidotransferase superfamily signature 245 258 - -
Phco8g03270 277 PRINTS Glutamine amidotransferase superfamily signature 150 161 - -
Phco8g03270 277 PRINTS Anthranilate synthase component II signature 78 92 - -
Phco8g03270 277 PRINTS Anthranilate synthase component II signature 150 161 - -
Phco8g03270 277 PRINTS Anthranilate synthase component II signature 245 258 - -
Phco8g03270 277 PRINTS Anthranilate synthase component II signature 123 132 - -
Phco8g03270 277 PRINTS Anthranilate synthase component II signature 176 184 - -
Phco8g03270 277 PRINTS Anthranilate synthase component II signature 199 211 - -
Phco8g03270 277 FunFam Anthranilate synthase beta subunit 1 76 268 - -
Phco8g03270 277 Gene3D - 76 268 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03270 Phco-Chr8 47356053 47359439 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03270 8 47356053 47359439 Phco8g03270 8 47356053 47359439 ECH