Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03252 ATGATAACCAGATCGAGAAAATTGAAGCGCAAGCTCGAGCCGGAGCCACTTCCACTCATCGTCACCAAGAAGCTCCGGCAGAAGCTGCCTCGCCGGCCAAGGCAAAACTTCTCGCCGGTGCTTCTCGTCAGAAACTCTGGAATGAATCCTCGTTTCTCCATGGATTCCAGCTCCGGCTCCGACTTCGCTGCAGGTGAAGCTTCTTGCAACTCCAGCAGAGCTTCCATCGCCGGCAAGGGAAACACGAACTCCAGAAATGAATCATCGATCGATTCAACGAGAAATCAGAGGTTAGAGAAGCGAAACGAGAACGAAGTGGAGGTGTCGGAGTCTTCGTGCGCGGACTCCAATTCGTTCGCTCGAGAACGAAGCAGAAGCTCAATTCTGAAGTTCAAAAGCGGAAGAGAATCTAAGAATCTGAGAGGAGATGACGACGTTTCGGAAGTGTGCCTGAAATCTGATACTACTGCTACTCTGAAGTTCAAAACTGTAAGCGAGTGTAAGAATGTAAAGGAACATGACGACGTTTCGTGCGGGAAATCAGTGATTACTTGCGAGGAACAGTTCAATTCGAAGTCCTCCAGTGACGGAAACGGAAACATGAAAATCTCTTCGGAGTCAAACGGAGACGTCGTGTCGTTTAGTTCCTTTGTTCGCGCGTCGTTTGAGGAGGAAAAGGATATCAGCAAGGAAAACAGCGCGTCGGAATGTGAATACTCTGAAGGTTCTAAAAACCTCCACGCGGAAGAGAATTGCGCGGATTTAATAGCGCAATCGATGACGAAGCAGGAATCCGAAAATGACGACCTCGCTGTGGACCTCGCTTGCTCTGAGGATCTGTGTTTCTCGTATTGTGAAGACGATGACGAATCGGAATATAGTTCCAGTCAGGGAACCGTGTTCTCTGAATTACATTCTGAGATTTTCGGTGAATGCTCGCAGCAGGAGATTTCGGATTACTCTCCGTCGGTGTTCGCGGATTCTGGAAGCCAGTTTTCCGAGGGATCCGTCGGAGAAACTCCTTCGCCGACGTATTTGTTGTTCCTTCAGTATCGCAAGGAGTTCACCACTCTAGTTTCTAGTTCTCCAGTGATAAACTCTTCTCCAAGAGACGAAGATGAAGCCAATTTTGTGAGATTCGATGATTCTGATGACGAAGACAGCTACCAGATGCTGAGGAAGAGGGAGAGGAAGCAAGGTTTTGTGTCAAATTATGGTGAAAGATATTTCTCTACTACTGAATTCGGAGAGACAGTACTTGGGCAGCGTTCGCAAATGGTTCACTGGATCGTTGAGCAATCTTGTCGAAAACAGCTTCGGCAAGAGACTATTTTTCTTGGCGTCAACCTACTTGACCGTTTCCTAAGCAAAGGATACTTCAAAGCCGAAAAACACCTTCAAATTGTTGGAATAGCTTGCCTCACGTTAGCGATCAGGATCGAAGAAAATCAGCAACACAACAGAGTGGGGCAAATCAGTTTCAACATAGGAAGCACTAAGTACAGTAGAGGCGAGGTGGTAGCTATGGAATGGATGGTGCAGGAGGTGCTCCAGTTTCAGTGCTTTCTGCCTACTATCTACAATTTCTTGTGGTTTTACCTAAAAGCAGCCAATGCTGATGCAGTCGTTGAGAAGAGGGTCAAGTATCTGGCAGTGCTGACACTGTCATCTCATGAGCAACTGTGCTACTGGCCTTCAACAGTTGCTGCAGCACTTGTAGTCCTGGCTGGTCTTGAAGTCAATCAAAGTTCATCGCTCAAAGTAATTGGGATTCACGTTAGATCAAAAGATGAGAATTTGTGCGAGTGCATAGAGAGCCTGGAGTGGCTGTTACGCTATATAGGATAA 1848 0.4708 MITRSRKLKRKLEPEPLPLIVTKKLRQKLPRRPRQNFSPVLLVRNSGMNPRFSMDSSSGSDFAAGEASCNSSRASIAGKGNTNSRNESSIDSTRNQRLEKRNENEVEVSESSCADSNSFARERSRSSILKFKSGRESKNLRGDDDVSEVCLKSDTTATLKFKTVSECKNVKEHDDVSCGKSVITCEEQFNSKSSSDGNGNMKISSESNGDVVSFSSFVRASFEEEKDISKENSASECEYSEGSKNLHAEENCADLIAQSMTKQESENDDLAVDLACSEDLCFSYCEDDDESEYSSSQGTVFSELHSEIFGECSQQEISDYSPSVFADSGSQFSEGSVGETPSPTYLLFLQYRKEFTTLVSSSPVINSSPRDEDEANFVRFDDSDDEDSYQMLRKRERKQGFVSNYGERYFSTTEFGETVLGQRSQMVHWIVEQSCRKQLRQETIFLGVNLLDRFLSKGYFKAEKHLQIVGIACLTLAIRIEENQQHNRVGQISFNIGSTKYSRGEVVAMEWMVQEVLQFQCFLPTIYNFLWFYLKAANADAVVEKRVKYLAVLTLSSHEQLCYWPSTVAAALVVLAGLEVNQSSSLKVIGIHVRSKDENLCECIESLEWLLRYIG 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03252 615 PIRSF Cyclin_A_B_D_E 54 287 IPR046965 GO:0016538|GO:0044772
Phco8g03252 615 PIRSF Cyclin_A_B_D_E 353 612 IPR046965 GO:0016538|GO:0044772
Phco8g03252 615 SUPERFAMILY Cyclin-like 382 520 IPR036915 -
Phco8g03252 615 ProSitePatterns Cyclins signature. 423 454 IPR006671 -
Phco8g03252 615 SMART cyclin_7 428 515 IPR013763 -
Phco8g03252 615 SUPERFAMILY Cyclin-like 524 611 IPR036915 -
Phco8g03252 615 PANTHER CYCLINS 356 606 IPR039361 -
Phco8g03252 615 Gene3D - 518 614 - -
Phco8g03252 615 MobiDBLite consensus disorder prediction 47 66 - -
Phco8g03252 615 MobiDBLite consensus disorder prediction 92 108 - -
Phco8g03252 615 Gene3D - 416 517 - -
Phco8g03252 615 Pfam Cyclin, N-terminal domain 420 520 IPR006671 -
Phco8g03252 615 CDD CYCLIN_SDS-like_rpt2 524 611 - -
Phco8g03252 615 Pfam Cyclin, C-terminal domain 524 608 IPR004367 -
Phco8g03252 615 MobiDBLite consensus disorder prediction 72 91 - -
Phco8g03252 615 MobiDBLite consensus disorder prediction 72 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03252 Phco-Chr8 47190600 47195497 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03252 8 47190600 47195497 Phco8g03252 8 47190600 47195497 ECH