Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03244 ATGAGCAAGACAATTCAAATGCATGGATTCCCAGCTACAGTGTCAGCTGAAGAGGTGAGGAAATTTTTGGAACAAAATACAGGCCCTCAAACTGTTCATGCTGTGGAGGTTGAGCAGCTCAAAGGAGATCCTACCACACATGTTAATGTTAAATTTACAGACAAAAAAAGTGTTGAAACAATCTTGCTCTTAGTTACTCAACACCTATCATACGGTGACCATGTTTTAAATGCTACAGAAATAAAACATGACATTTTGCCAAAGCAGAGGAACTTTTCTCACAGCCTAGATGACATAGCAGTGCACTTTGGATGTCAAACATCCAAGAACAAACTTAGTGTACTCTGGGAACATCCAAGTGCTTCAGTCAAATTCGGGTTCAGACTGAGAAAGATGTATATATTTTTCCATTATTTGTCAGTGGATTATAAGCTGCAGATTTCTTCTGAGAGCATGTCTCGTATTGAGCTGCATCACTCAGATGATTTAACCAAGAAGCTCCTCCTTTTTCAGTTACGCAACGCTCCTCTGATCTATGAGAAAGATTTTTCCAAAAGCAAATATTTTAAGGAGGCTTGTGACAACAACCATTGGTTTCGAGGAGTAGATTTCACCCCATCATGCAGCATCGGACAATCTCCTACTTTATGTTTTGAGCTTCCAAAAAGTGTTGAACTTCCAAAGTTCAATCAGCACTATCGTAATTATAATGAAGTTGATGACAGTGTCTTCACTCTTGAGAGACACCTTGGTTTCTCTTCTAACTTCAATTTTGTTCCCATAGTGATCCCTCCAGAAGGCTTCAACTTACCATACAAAATTTTGTTCAAAATCAACTCACTAATTCAGCGTGGATGTCTTCCTCTGCTGGCAATTGACATCAATTTTTTTCAACTGGTTGACCCTGGAAAAGTAAAGCTTGAATACATAGAAAGTGCCCTGCATAAATTAGATCAATTAAAAGTGTGCTGCTATGAACCTGCACAATGGTTGGAGAAACAGTATAAGAAATACTCAGAAAATGGTGTACTTCCAGTATCTAGTGCTATTTCATTGGATGATGGGTTGGTCTATGTGCATAGAGTACAAGTAACTCCATCCAAAATATATTTCTGTGGTCCTGAAGTGAACCTTTCTAATCGTGTCTTGCGCAACTATCCTCAAGACACTGATAACTTTCTTCGTGTTTCTTTCGTTGATGAAGACATGGATAAACTTCACTCAGCAGATTTGGTGCCACGTTCATCTTCTGTGGACATGGACAGAGAAACAAAGCTTCATGAGAGGGTACTGGCAACACTTAAAAATGGCATAGAAATTGGTGATAAGAAATTTGAGTTTCTTGCCTTCTCACCAAGTCAGTTGCGGGATAACTCTGTGTGGATGGTTGCGTCAAGAACTGGACTTACTGCATCTGATGTAAGAAACTGGATGGGAGAGTTTCATGAAATTAGAAATGTGGCCAAATATGCAGCAAGGCTGGGTCAATCATTCAGCTCTTCCAGGGAAACAGTGAGAGTTGACAGACATGAAATTAAAATTATTCCTGATATAGAATTTAAAAGAGGTGAAACCAAATACTGTTTCTCTGATGGAATTGGGAAGATATCTTATGAATTGGCTCAAGAAGTGGCTAAGAAATGTGGTTGTAGGGATAATAATACTCCATCTGCATTTCAAATCAGATATGGAGGGTACAAAGGTGTTGTTGCTGTTGATCCTACCTCATCAACTAAACTGTCCTTAAGAAAGAGCATGTGCAAGTACAAGTCAGAAAACACAAAATTGGATGTTTTGGCATGGAGCAAATACAAACCTTGTTACCTTAATCGTCAAATAATCACCCTCTTGTCCACACTCGGGGTCCAGGATCAAGTCTTCAGAAAGAAACAAAGGGAAGTTCTTAATCAACTTAAAATGTTATCAAGAAATCCATTGATGGTATTAGATTATATGTCCACAGGAGAGATTGCAAAAGTTTTGAAGGAAATGCTCATTTGTGGCTTTCATCCAAATAAGGAACCATTTCTTTCCATGATGTTGCAAACATTATATGCATCAAAATTACAGGAATTGAAGCTCAAAACTAGGATACTTGTTAAGAGAGGAAGAGCATTGTTAGGATGCTTGGATGAAACTAGGACTCTAAAATATGGAGAGGTATTTGTGCAGATAGCTCACCAAAGAAATAAGCAATTTCTTTCTATGTCCTCTCTTTCTTCTAACAGATATGCATCAAACAAAAGCAGACATATTGTTAAGGGAAAGGTAGTTGTAGCCAAAAATCCCTGTCTACACCCGGGAGATGTTCGAGTTTTAAGAGCAGTGGATGTACCTTCTCTGCATCATATGGTGGACTGTGTTGTTTTTCCACAGAAGGGGAGAAGACCACATCCCAATGAATGTTCTGGAAGTGACTTGGATGGAGATATCTACTTTGTCAGCTGGGACCCTGATCTTATTCCTCCTCGTCAGGAAAATCCCATGGATCATGCACCATCTCCAGTTGTGAATGTGGATCATGATGTTACATTACAGGAAGTTCAGGAGTATTTTGCTCACTACATAGTTAAAGACAGGTTGGGCATTGTTGCAAGTGCGCACACGGTGTTTGCTGATAAGGATCCTCAAAAGGCTATGAGCCCTGCATGCATTGAGCTTGCAAAGCTACACTCAGTTGCTGTTGATTTTGCAAAATCTGGTGTGCCAGCAGAAGTTCCACAACATCTACGCGTGGAAGAGTATCCAGATTTCATGGAAAAGCCAGATAAACCAAGTTACCAATCAAATAGCATTATAGGAAAGCTTTATCGTGAGGTGAAGAATGTTGCACAACACAAGAGTCTCACCAAACCCTTCACTAGAAGGGTGGCAAGGCAATCATACGACCGTGAGATGGAGATTGAAGGCTTTGAGAAGTATACAGCAAGTGCTTGTGAATACAAGAACATGTATGACTTCAAGCTGTGGAACCTAATGGATTACTATGGTATAGAAACAGAAGCAGAAATAATCAGTGGCAATATCTTGAAAATGTCAAAATCCTTCAGAGAAAGAAAGGACTTGGAAGGAGTTAATCATGCTGTGATGTCTCTAAGAAATGAAGCTAGAAGCTGGTTCAATGTGATGATAAAAAACAAGTCAAATTCTCAAGTTGATGATGATGATGATGCCAATGCAATAGCATCAGCTTGGTACCATGTTACATATCATCCTAGGTACTGGGGATCCTACAATCAAGGGCTAAACAGGGATCATTTCCTCAGCTTCCCATGGTGTGTGCATGACACTCTCATCCAGATAAAGAAGGACAAAGTAAGACAGAGAACTTTTACAACGGAGCTCTGGAGAATACTGAAACTGATTCCTCTATTACTGTTTTTCTTCCTATTGTGGATAATAGTACAATATCTAAGGAATTGA 3423 0.3935 MSKTIQMHGFPATVSAEEVRKFLEQNTGPQTVHAVEVEQLKGDPTTHVNVKFTDKKSVETILLLVTQHLSYGDHVLNATEIKHDILPKQRNFSHSLDDIAVHFGCQTSKNKLSVLWEHPSASVKFGFRLRKMYIFFHYLSVDYKLQISSESMSRIELHHSDDLTKKLLLFQLRNAPLIYEKDFSKSKYFKEACDNNHWFRGVDFTPSCSIGQSPTLCFELPKSVELPKFNQHYRNYNEVDDSVFTLERHLGFSSNFNFVPIVIPPEGFNLPYKILFKINSLIQRGCLPLLAIDINFFQLVDPGKVKLEYIESALHKLDQLKVCCYEPAQWLEKQYKKYSENGVLPVSSAISLDDGLVYVHRVQVTPSKIYFCGPEVNLSNRVLRNYPQDTDNFLRVSFVDEDMDKLHSADLVPRSSSVDMDRETKLHERVLATLKNGIEIGDKKFEFLAFSPSQLRDNSVWMVASRTGLTASDVRNWMGEFHEIRNVAKYAARLGQSFSSSRETVRVDRHEIKIIPDIEFKRGETKYCFSDGIGKISYELAQEVAKKCGCRDNNTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMCKYKSENTKLDVLAWSKYKPCYLNRQIITLLSTLGVQDQVFRKKQREVLNQLKMLSRNPLMVLDYMSTGEIAKVLKEMLICGFHPNKEPFLSMMLQTLYASKLQELKLKTRILVKRGRALLGCLDETRTLKYGEVFVQIAHQRNKQFLSMSSLSSNRYASNKSRHIVKGKVVVAKNPCLHPGDVRVLRAVDVPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVSWDPDLIPPRQENPMDHAPSPVVNVDHDVTLQEVQEYFAHYIVKDRLGIVASAHTVFADKDPQKAMSPACIELAKLHSVAVDFAKSGVPAEVPQHLRVEEYPDFMEKPDKPSYQSNSIIGKLYREVKNVAQHKSLTKPFTRRVARQSYDREMEIEGFEKYTASACEYKNMYDFKLWNLMDYYGIETEAEIISGNILKMSKSFRERKDLEGVNHAVMSLRNEARSWFNVMIKNKSNSQVDDDDDANAIASAWYHVTYHPRYWGSYNQGLNRDHFLSFPWCVHDTLIQIKKDKVRQRTFTTELWRILKLIPLLLFFFLLWIIVQYLRN 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03244 1140 PANTHER RNA-DEPENDENT RNA POLYMERASE 2 1108 IPR007855 GO:0003968
Phco8g03244 1140 Pfam RNA dependent RNA polymerase 364 940 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03244 Phco-Chr8 47120091 47125314 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03244 8 47120091 47125314 Phco8g03244 8 47120091 47125314 ECH