Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03233 ATGGCGACCATGACGAGCTTGATCGGTCTCATCAACAAGATCCAACGCGCTTGCACGGTGCTCGGCGACCACGGCGGCGAGGGAATGTCCCTGTGGGAGGCGCTTCCCACCGTCGCGGTGGTTGGAGGACAGAGTTCAGGAAAATCATCAGTGTTGGAAAGTGTTGTGGGAAGGGATTTTCTGCCACGTGGATCTGGTATTGTCACACGGAGGCCACTAGTGCTGCAACTTCACAAGACAGAAGAGGGGAAACAGGAATATGCTGAGTTTCTTCATCAATCAAGGAAGAGATTCTCTGACTTTGCTGCTGTGAGACAAGAAATTTCAGATGAAACAGATCGTATAACTGGGAAGACAAAGGCAATTTCAAACGTTCCAATTCAACTGAGCATTTATTCTCCACATGTTGTGAACTTAACCCTCATCGACCTTCCTGGGTTGACAAAAGTTGCTGTAGAGGGACAATCAGACACTATTGTTCAAGATATTGAGAACATGGTCCGTTCTTATATTGAGAAGCCCAATTGCATTATATTGGCCATCTCTCCTGCAAATCAAGATATTGCCACTTCAGATGCAATAAAAATTGCAAGGGAAGTTGATCCTTCTGGTGAAAGGACATTTGGGGTGTTGACAAAACTTGATCTTATGGATAAAGGAACTAATGCAGTTGAGGTTCTCGAAGGAAGACAATACAGGTTGCAGCATCCTTGGGTTGGAATTGTCAATCGTTCACAGGCTGATATTAATAAAAATGTTGACATGATTGTTGCTCGCAAGAAGGAGCGTGAATATTTCGAGACTAGTCCCGAGTATGGACATTTGGCACATAAAATGGGGGCAGAATATCTGGCCAGACTTCTATCCCAACATTTGGAATATGTTATTAGGCAGAAGATACCCAGTATCATTGCCTTAATAAATAAAGCCATTGACGAGCTTAATGCAGAGTTAGACCGAATTGGCAGGCCAATAGCTGTGGATTCAGGGGCGAAGTTATACACAATTTTACAGATGTGTCGAGCATTTGATAAAGTATTTAAAGAACACCTGGATGGAGGCCGTCCTGGTGGGGACCGGATATATGGTGTTTTTGACCACCAATTACCAGCTGCTTTAAAAAAGCTCCCATTTAATCGTCATCTTTCCGTAAAGAATGTTGAAAGGGTAGTTACAGAAGCGGATGGTTATCAGCCACATCTAATTGCTCCAGAGCAAGGCTACAGAAGACTTATTGAGGGATCTATTGGCTATTTCAAAGGCCCAGCTGAAGCCACTGTGGATGCTGTCCACCTAATTCTGAAGGAGCTTGTACGGAAGTCAATTGCAGAAACTGAGGAATTGAAGAGGTTTCCCACCCTCCAAGCTGATATAGCTGCTGCTGCAAACGATGCTTTGGAACGATTCCGAGAAGAAAGTAGGAGGACTGTGATTCGCATGGTGGATATGGAGTCTGGCTATCTAACAGTGGAATTTTTTCGGAAGATGCTTGTTGAACCAGAAAAAAAATCAGATCCAAAGAACCCAAATCGGAGTGCTCCTAATCCCAATGTGGACAGTACAGATAGTCACCTCAGTAAAATTGGGTCAAATGTTAATGGTTATATCAACATGGTTTGTGATTCACTAAAACATTCTATACCGAAAGCCGTGGTTCATTGTCAAGTTAGAGAGGCAAAGAGATCATTGCTAAACCAATTTTATGTTCAAGTCGGGAAAAGGGAGAAGGATCAATTGGGGGCCTTGTTGGATGAAGACCCTGCACTTATGGAAAAGAGATCACAACTAGCTAAAAGGCTTGAATTGTACAAGCAAGCTATGGATGATATTGATTCTGTGGCTTGGAAATAA 1851 0.4333 MATMTSLIGLINKIQRACTVLGDHGGEGMSLWEALPTVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEEGKQEYAEFLHQSRKRFSDFAAVRQEISDETDRITGKTKAISNVPIQLSIYSPHVVNLTLIDLPGLTKVAVEGQSDTIVQDIENMVRSYIEKPNCIILAISPANQDIATSDAIKIAREVDPSGERTFGVLTKLDLMDKGTNAVEVLEGRQYRLQHPWVGIVNRSQADINKNVDMIVARKKEREYFETSPEYGHLAHKMGAEYLARLLSQHLEYVIRQKIPSIIALINKAIDELNAELDRIGRPIAVDSGAKLYTILQMCRAFDKVFKEHLDGGRPGGDRIYGVFDHQLPAALKKLPFNRHLSVKNVERVVTEADGYQPHLIAPEQGYRRLIEGSIGYFKGPAEATVDAVHLILKELVRKSIAETEELKRFPTLQADIAAAANDALERFREESRRTVIRMVDMESGYLTVEFFRKMLVEPEKKSDPKNPNRSAPNPNVDSTDSHLSKIGSNVNGYINMVCDSLKHSIPKAVVHCQVREAKRSLLNQFYVQVGKREKDQLGALLDEDPALMEKRSQLAKRLELYKQAMDDIDSVAWK 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03233 616 SMART GED_2 520 613 IPR003130 GO:0003924|GO:0005525
Phco8g03233 616 FunFam dynamin-related protein 1E 4 310 - -
Phco8g03233 616 Pfam Dynamin GTPase effector domain 522 613 IPR003130 GO:0003924|GO:0005525
Phco8g03233 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 309 IPR027417 -
Phco8g03233 616 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Phco8g03233 616 Gene3D - 4 310 IPR027417 -
Phco8g03233 616 Pfam Dynamin central region 222 489 IPR000375 -
Phco8g03233 616 MobiDBLite consensus disorder prediction 509 524 - -
Phco8g03233 616 Pfam Dynamin family 38 213 IPR045063 -
Phco8g03233 616 Gene3D Dynamin, middle domain 332 593 - -
Phco8g03233 616 FunFam Dynamin-related protein 1C 332 593 - -
Phco8g03233 616 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Phco8g03233 616 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Phco8g03233 616 MobiDBLite consensus disorder prediction 501 524 - -
Phco8g03233 616 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Phco8g03233 616 PRINTS Dynamin signature 133 150 IPR022812 -
Phco8g03233 616 PRINTS Dynamin signature 225 244 IPR022812 -
Phco8g03233 616 PRINTS Dynamin signature 202 218 IPR022812 -
Phco8g03233 616 PRINTS Dynamin signature 183 201 IPR022812 -
Phco8g03233 616 PRINTS Dynamin signature 60 77 IPR022812 -
Phco8g03233 616 PRINTS Dynamin signature 35 53 IPR022812 -
Phco8g03233 616 ProSiteProfiles GED domain profile. 525 616 IPR020850 -
Phco8g03233 616 PANTHER DYNAMIN 6 613 IPR022812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03233 Phco-Chr8 47025445 47039676 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03233 8 47025445 47039676 Phco8g03233 8 47025445 47039676 ECH