Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03225 ATGTCATCACAAACCGCCGCAGCGGAGGCGCCGCTGCTCCGCAACCGCCAAGACGCAGCCCGAGCGCCTGCGCTAGCGCTCCTCCTCGGCCGCGCCGGCCGCCGAGGGCCCTCCATGCTGGTGCGGGAGACGGCGGCGCGTGAGCTCGAGGAGCGCCGCGCGGACTGGGGCTACTCCAAGCCGGTGGTGGCTCTCGACATGTCGTGGAACATGGCGTTCGTCGTCGTCTCGGTGGTGATGCTCGCGTGCACCACCAGCGAGCGGCCGAACTCGCCGATCCGCGTGTGGATCGTCGGCTACGGGCTGCAGTGCCTTGTGCATGTGGTGCTCGTTTGGCTCGAGTACCGGCGCCGTAGCCGGAGGGACTCGCGCCGCGGCCAGGGGACGCGGGACGTGGAGAGCCAAGCCGGAAGTGACAACGATGATGGTGGCAACGACAGCGACAGCGATGACGTCGATGGAAGCTCTGGCAATTCGTCTCGCTCCCGGTTCACAAAACGATGTGAATCATTAAATACTGGGGTTTCATTCCTTTGGTGGATAGTGGGCTTTTACTGGGTTGTCTCTGGTGGTGATATACTTCTGCAAGATGCCCCACGATTGTACTGGTTGTCTGTTGTCTTTCTGGCATTTGATGTCTTTTTTGCCATCTTTTGTGTTGTCTTGGCGTGCTTGATTGGTATTGCTCTTTGTTGTTGTTTGCCCTGCATCATTGGTATCCTCTATGCGGTTGCAGGACAGGAAGGTGCGTCAGAAGCAGATCTTAGCATACTTCAAAAATACAGATTTCGAATACCAAGCAATGAGGATAAGTCCAGTGGTGGAGCTGGATCAATGGTTCCCATAGAAACCAGCAGTGCTTACTTGGCAACTGAACGAATACTTTTACCAGAGGATGCGGAATGCTGTATTTGCCTCTGTTCATACGAGGACGGAGCAGAGCTCCATGCTCTTCCTTGCAATCATCATTTTCATTCTTCATGCATAGTGAAATGGCTGAAGATGAATGCCACTTGTCCTCTCTGCAAGTACAATATTCTCAAGGGAAACGAACAAGTGTGA 1062 0.5518 MSSQTAAAEAPLLRNRQDAARAPALALLLGRAGRRGPSMLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVSVVMLACTTSERPNSPIRVWIVGYGLQCLVHVVLVWLEYRRRSRRDSRRGQGTRDVESQAGSDNDDGGNDSDSDDVDGSSGNSSRSRFTKRCESLNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIGILYAVAGQEGASEADLSILQKYRFRIPSNEDKSSGGAGSMVPIETSSAYLATERILLPEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03225 353 PANTHER TARGET OF ERK KINASE MPK-1 32 351 - -
Phco8g03225 353 SMART ring_2 302 342 IPR001841 -
Phco8g03225 353 Pfam Ring finger domain 301 343 IPR001841 -
Phco8g03225 353 SUPERFAMILY RING/U-box 289 347 - -
Phco8g03225 353 CDD RING-H2_PA-TM-RING 301 343 - -
Phco8g03225 353 FunFam E3 ubiquitin protein ligase RIE1 282 350 - -
Phco8g03225 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 348 IPR013083 -
Phco8g03225 353 MobiDBLite consensus disorder prediction 124 163 - -
Phco8g03225 353 ProSiteProfiles Zinc finger RING-type profile. 302 343 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03225 Phco-Chr8 46941355 46948911 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03225 8 46941355 46948911 Phco8g03225 8 46941355 46948911 ECH