Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03222 ATGGCCGAAGCGCTCTCGGTGATTCCGGCCGCCGTGCTTCGCAACCTTGCCGACAAGCTCTACGAGAAGCGCAAGAATGCAGCACTTGAGGTTGAGGGGATTGTGAAGCAGCTTGCTTCTTCTGGGGATCATGATAGGATAATTGCTGTGATCAATTTGTTGACTAACGAATTTACTTATTCGCCTCAAGCAAATCACCGGAAGGGAGGGTTGATAAGCTTAGCTGCTGCCACTGTTGGGTTGACCACTGAAGCTGCTCAGCATCTCGAGCTAATTGTGCCCCCTGTATTAAATTCTTTTGCTGATCAAGATAGTAGAGTTCGGTATTATGCTTGCGAAGCATTATACAACATAGCAAAGGTTGTGAGAGGAGATTTTATTATATTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGACTCAGATGCCAATGTACAAAGTGCTGCTCATCTTTTAGATCGACTTGTGAAGGATATTGTGACCGAAAGTGATCAGTTCAGTATTGAAGAATTCATACCGTTGTTGAGGGAGCGCATGAATGTATTGAATCCATATGTTCGTCAGTTTTTGGTAGGATGGATTACTGTATTGGATAGTGTCCCGGATATTGACATGCTGGGTTTTCTTCCTGATTTTCTTGATGGTTTGTTTAATATGCTGAGCGATTCAAGTCATGAAATACGTCAACAGGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATTAAAAATTCACCATCTGTAGATTATGGTCGAATGGCGGAAATACTGGTACAAAGGGCAGGTTCTCCAGATGAATTTACTAGGTTAACAGCTATGACATGGATAAACGAGTTTGTCAAACTTGGTGGAGATCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCTTGCATATCTGATAGAGAAGACAAAATTAGAGTGGTTGCTCGTGAAACCAATGAAGAGCTACGTGCAATCAAGGCTGATCCAGCTGAAGCATTTGATGTAGGAGCAATCCTCTCCATTGCTAGGAGGCAACTATCTAATGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAACCCTTTTATCCAGACATCGTAGTGAGGTTTTGATATTTCTGAATGACATATTTGATACCCTACTCAAAGCACTTTCAGATTCATCTGATGAGGTTGTGCTTCTAGTGCTTGATGTTCATGCATGCATTGCAAAAGATCCCCTCCACTTCCGGCAGCTCGTTGTTTTTCTAGTGCACAATTTCCAATTAGATAATTCTCTTTTGGAGAAACGTGGTGCTCTGATAATCCGCCGCCTTTGTGTTCTCTTGAATGCTGAGAGAGTCTATCGAGAACTTTCTACAATATTAGAAGGAGAATCTGATTTGGATTTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCAGAATTATCTGAGATTCGAGATCTTTTGAAGCAATCACTTGTAACTCCTGCTGGGAAGGACCTATATGATTCTCTGTATGCTTCTTGGTGTCATTCTCCAATGGCAATTATAAGTCTATGCTTTTTAGCTCAAACTTACCAACATGCCAGTGCTGTGATTCAGTCACTCGTGGAGGAGGATATTAATGTCAAATTGTTGGTCCAACTGGATAGATTAATCCGCTTGATGGAAACTCCAATCTTTGCCTATCTTCGATTGCAGCTGCTTGAACCTGGAAGATATATTTGGTTATTCAAGGCATTGTATGGTCTCCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTTAAGATACTAAAAACTCGTTTAAAAGCTGTGCCATCATATTCAATTAGTGGTGAGCAATTGAAGAGAATGCCTTCTGGGGATCCCTACCAATTTCATAACGTGCCTGATGGGTTTCGAACCATTGGGGATGGTGTTGTAGCCGAAGATGGTGGGAGCTCACGTAATGGAATAAATTTTGCTGCAAGACTACAACAATTTCAGCAAATGCAGCACAAGCATCGGGTGCTTGCCAAAACACAGGCAAAGTCACGCAATATTTCCCCTTCATCGTCAAAGGAGGCACAAAGAGAAGAAGAACCAAGAAGACCCCAGTCTGTCGAACGTAATGTTCCTCCTTCAAGATCATCAAAGAGAAGTCCAGGGAAGCTACAATTATAA 2172 0.4194 MAEALSVIPAAVLRNLADKLYEKRKNAALEVEGIVKQLASSGDHDRIIAVINLLTNEFTYSPQANHRKGGLISLAAATVGLTTEAAQHLELIVPPVLNSFADQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAMTWINEFVKLGGDQLVPYYADILGAILPCISDREDKIRVVARETNEELRAIKADPAEAFDVGAILSIARRQLSNEWEATRIEALHWISTLLSRHRSEVLIFLNDIFDTLLKALSDSSDEVVLLVLDVHACIAKDPLHFRQLVVFLVHNFQLDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRDLLKQSLVTPAGKDLYDSLYASWCHSPMAIISLCFLAQTYQHASAVIQSLVEEDINVKLLVQLDRLIRLMETPIFAYLRLQLLEPGRYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSISGEQLKRMPSGDPYQFHNVPDGFRTIGDGVVAEDGGSSRNGINFAARLQQFQQMQHKHRVLAKTQAKSRNISPSSSKEAQREEEPRRPQSVERNVPPSRSSKRSPGKLQL 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03222 723 PANTHER TAX1 BINDING PROTEIN-RELATED 7 686 IPR026825 GO:0006661|GO:0070772
Phco8g03222 723 MobiDBLite consensus disorder prediction 689 703 - -
Phco8g03222 723 FunFam protein VAC14 homolog 126 248 - -
Phco8g03222 723 MobiDBLite consensus disorder prediction 706 723 - -
Phco8g03222 723 MobiDBLite consensus disorder prediction 668 723 - -
Phco8g03222 723 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Phco8g03222 723 FunFam ARM repeat superfamily protein 6 125 - -
Phco8g03222 723 MobiDBLite consensus disorder prediction 668 688 - -
Phco8g03222 723 FunFam protein VAC14 homolog isoform X1 249 410 - -
Phco8g03222 723 Gene3D - 2 246 IPR011989 -
Phco8g03222 723 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Phco8g03222 723 Gene3D - 247 411 IPR011989 -
Phco8g03222 723 SUPERFAMILY ARM repeat 4 542 IPR016024 -
Phco8g03222 723 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03222 Phco-Chr8 46901169 46924201 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03222 8 46901169 46924201 Phco8g03222 8 46901169 46924201 ECH