Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03220 ATGACTTTCATAACCCACCAAGCCATTTTCAACGCGGTTCGATGTGGGGACCTTGAAGGGCTCAAGGAGCAGCTGAAGAATTGCATGGGTGAGGTCTCATCAGAAGGGGTGGTTTCTGAGGTGATGTCTATGCAGAACGATGCAGGAGAAACTTTGTTGTATATAGCTGCTGAGATTGGTCATCTTGAGGTGTTCAGCTTCTTGCTTGGTTTGTGTGACTTGGAGGTGCTGAAGATCAGGGCCAACTCTGATATGAACGCCTTTCACATCGCAGCCAAACGTGGCCATTTGGATATCGTAAAGGAAATTTTGAGCACTTGGCCTGAGGTTTGTAAGATATGCAACTCCTCTAACACTAGTTCCCTATATCTTGCTGCTGTTCAAGATCATTTGGATGTAGTGAATGCAATATTGGATGTTGATGTGAGTTCAATGATGATAGTAAGGAAAAACGGCAAAACTGCATTGCACAATGCTGCTAGGTATGGCATCCTTCGCATTGTAAACGCACTGATTGCCCGTGATTCTGGAATAGTCTGCATCAAAGATAGAAAGGGTCAAACTGCATTGCATATGGCTGTGAAAGGACAAAGTACTTCGGTGGTGGAAGAGATATTACAAGCTGACCTTACGATATTGAATGAACGAGATACGAAGGGAAACACTGCTCTTCACATGGCTACCAGGAAAGCCCGTTCACAGATAGTGAGCCTCTTGTTAATCTACACAGCTATAGATGTCAATGCCATCAATAATCAGAAGGAAACAGCCTTGGATTTGGCAGATAAACTGCCTTATGGAGATTCATCTTTGGAAATCAAGGAGGCCCTTACAGAATGTGGTGCCAAGCATGCCAGGCATATTGGGAAAGTGAATGAAGCCATGGAACTAAAAAGAGCTGTGAGTGATATAAAACATGAGGTGCAATCACAGCTTATACAGAATGAAAAGACTCGCAGACGAGTTTCTGGTATCGCTAAGGAATTGCAGAAAATTCATAGAGAGGCAGTTCAGAACACCATCAATTCTGTCACAGTAGTATCCGTCCTCTTTGGCTCAATAGCATTCATGGCCTTATTCAGCTTACCAGGTCAATATCGAAAGAAGCAACCGGAGGCAGGAGAGGCAAATATAGCCGATGATGTTGCCTTCAGTGCTTTCTGTCTTTTGAATGCTACAGCTCTTTTCATTTCTCTTGCAGTTGTTGTTGTTCAAATCACTTTGGTGGCTTGGGATACAAGGGCTCAAAGGCAGGTTGTGTCAGTGATTAACAAGCTAATGTGGGCTGCATGTTCTTGCACCTGTGGGGCTTTTCTTGCTATATGCTTTGTGGTGGTGGGAGAGGAAACATGGCTTGCTATTGGTGTCACCCTTTTAGGAGCACCAATTCTACTTGGCACTCTAGCATACTTGTGCTACTTTGTATTTAGGAGACGTTTTGGACTCCGTAGTGATTCCCAGAGACTAGTCAAGAGACCAAGTGGAAGCAAATCTTTCTCATGGTCTTACTCAGTAAACATATCAGATGCAGATGATTATGATTCTGATCATGAGAAGATATATGCTCTGTGA 1572 0.4358 MTFITHQAIFNAVRCGDLEGLKEQLKNCMGEVSSEGVVSEVMSMQNDAGETLLYIAAEIGHLEVFSFLLGLCDLEVLKIRANSDMNAFHIAAKRGHLDIVKEILSTWPEVCKICNSSNTSSLYLAAVQDHLDVVNAILDVDVSSMMIVRKNGKTALHNAARYGILRIVNALIARDSGIVCIKDRKGQTALHMAVKGQSTSVVEEILQADLTILNERDTKGNTALHMATRKARSQIVSLLLIYTAIDVNAINNQKETALDLADKLPYGDSSLEIKEALTECGAKHARHIGKVNEAMELKRAVSDIKHEVQSQLIQNEKTRRRVSGIAKELQKIHREAVQNTINSVTVVSVLFGSIAFMALFSLPGQYRKKQPEAGEANIADDVAFSAFCLLNATALFISLAVVVVQITLVAWDTRAQRQVVSVINKLMWAACSCTCGAFLAICFVVVGEETWLAIGVTLLGAPILLGTLAYLCYFVFRRRFGLRSDSQRLVKRPSGSKSFSWSYSVNISDADDYDSDHEKIYAL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03220 523 ProSiteProfiles Ankyrin repeat region circular profile. 219 240 - -
Phco8g03220 523 ProSiteProfiles Ankyrin repeat profile. 219 252 IPR002110 GO:0005515
Phco8g03220 523 SUPERFAMILY Ankyrin repeat 8 281 IPR036770 -
Phco8g03220 523 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 11 502 - -
Phco8g03220 523 Gene3D - 5 143 IPR036770 -
Phco8g03220 523 ProSiteProfiles Ankyrin repeat region circular profile. 151 178 - -
Phco8g03220 523 Pfam Ankyrin repeats (3 copies) 183 249 IPR002110 GO:0005515
Phco8g03220 523 Pfam Ankyrin repeats (3 copies) 53 139 IPR002110 GO:0005515
Phco8g03220 523 SMART ANK_2a 48 76 IPR002110 GO:0005515
Phco8g03220 523 SMART ANK_2a 185 214 IPR002110 GO:0005515
Phco8g03220 523 SMART ANK_2a 151 180 IPR002110 GO:0005515
Phco8g03220 523 SMART ANK_2a 117 147 IPR002110 GO:0005515
Phco8g03220 523 SMART ANK_2a 219 249 IPR002110 GO:0005515
Phco8g03220 523 SMART ANK_2a 83 112 IPR002110 GO:0005515
Phco8g03220 523 Gene3D - 144 301 IPR036770 -
Phco8g03220 523 ProSiteProfiles Ankyrin repeat profile. 151 178 IPR002110 GO:0005515
Phco8g03220 523 Pfam Domain of unknown function 335 444 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03220 Phco-Chr8 46894470 46897796 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03220 8 46894470 46897796 Phco8g03220 8 46894470 46897796 ECH