Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03656 ATGTACGCACACATAGTTTGTGACGATGAAAAGTTGCCTCAGAAATCAGAAAAGATGGGCGAAGACATAGTTGAGAGGGCGCTGAACATTTTGGGAAAAGGTTTCGACTTGACCTTTGATTTCAGACTCAAGTTCTGCAAAGGGGAAGAACGTTTGGTTCTTCTCAACGAAACCGAGAAACGAGAGCTCACGGTGCCAGGTTTTGGACCCATCAGCGATGTCTCCGGCGACATCAAATGCGACAAGGGCGATTGCACCCGCTACCAATCCGACATCCTCACCTTCAATCAAATGTCAGAGCTCTTCAACCAGAAGAGTTCGATCCCTGGAAGAATCCCATCTGGGTACTTCAACACCGCGTTTGGGTTTGATGAATGTTCCTGGGCAACCGATGCTGCTAACACCAAGTGTTTGGGTATTGATGGTTATTTCATCAAACTCTTCAGTGTTCATATTGATCGCTACCCTCTTCTTCTGTCTCATCAAGTCCTTCAAGCTGTTCCTTCTTCCTGGGACCCCCCTGCACTTGCAAGATTCATTGAGAATTTCGGCACACACATCCTTGTGGGGCTTAGCATTGGTGGCCAAGATTTAGTGTTGGTGAAGCAAGACGTGTCTTCCAGCTTGGAGCCATCAGAGCTGAAGGGGCACTTGGAAGAACTTGGAAATCAATTATTCACTGGGACATGCAGTTTCCTTCCAAGGTCCAAAGACCAAAAATTCAAGGTACCACAGGCTTTTGATGTCTTTGGTCCACAAATTGTTGCCTTCAATAGCTCTACATCAGTTCGTGCAAAAGATGGAATTACTGTGATATGTGCAAAGAGGGGTGGGGATACCCAACTGAGGGACCATAGTGAGTGGCTTCACACAGTTCTAAAGAAGCCAGATGCTGTTGATTTTAGCTTCATTCCCATCACTTCTCTTCTTAAAGGTGTTCCAGGCAAAGGCTTTCTATCCCATGCCATCAACCTCTACCTTCGATATAAGCCTCCCATGTCAGATTTACCCTACTTTCTTGACTATCAATCACACAAGCTTTGGGCTCCCATTCACAATGATCTTCCACTGTGTCCAGCCACAAACAGAACCACCTCTTCACCTTCTCTCAGTTTCAACTTGATGGGTCCCAAGCTTTATGTAAACACATCAAAGGTAACAGTTGGTAAAAGGCCAATCACAGGGATCCGTTTGTTTCTTGAGGGCATGAAATGCAACAGGTTAGCCATACACGTGCAACATCTATTGAACACTCCAATAATGCTTATCGACAAAATAGAGGACGCCCCATTATGGTCAGAAGAAATCAGTGATGACGGTTTCTTTGAAGCAATCAATGGGAAGAAATTTTCCCATGTATGTACAGCACCAGTAAAATACGACCCTAAATGGAGCTCTGATAAGGATGTGGCCTTTATAGTCACAGGTGCCCAACTTCATGTGAAGAAACATGACTCAAGGAGTGTCCTTCATCTGAGACTGATGTTCTCTAAGGTGTCTAATTTTGTAGTTGTAAAATCAAGTTGGACACAGGGCTCCTCTGGGTTATCACAGAGGTCCGGCATTTTCTCAGTAATAAGCACATCAATTTCGGGTAAAGACCAGAAAAAACCAGTTGTAGTTTTGGATTCCAGTGTGTTTCCAACAGGACCTCCAGTGCCTGTGCAAACGCAAAAGCTGTTGAAATTTGTAGACACTTCACAGTTGTGTAAAGGTCCACAAGATAGTCCTGGCCATTGGTTGGTCACTGGGGCAAGGTTGGTTTTGGACAAGGGTAAGATATGCTTATGGGCTAAGTTCTCTTTGTTAAATACTGGTTCGTGA 1824 0.4468 MYAHIVCDDEKLPQKSEKMGEDIVERALNILGKGFDLTFDFRLKFCKGEERLVLLNETEKRELTVPGFGPISDVSGDIKCDKGDCTRYQSDILTFNQMSELFNQKSSIPGRIPSGYFNTAFGFDECSWATDAANTKCLGIDGYFIKLFSVHIDRYPLLLSHQVLQAVPSSWDPPALARFIENFGTHILVGLSIGGQDLVLVKQDVSSSLEPSELKGHLEELGNQLFTGTCSFLPRSKDQKFKVPQAFDVFGPQIVAFNSSTSVRAKDGITVICAKRGGDTQLRDHSEWLHTVLKKPDAVDFSFIPITSLLKGVPGKGFLSHAINLYLRYKPPMSDLPYFLDYQSHKLWAPIHNDLPLCPATNRTTSSPSLSFNLMGPKLYVNTSKVTVGKRPITGIRLFLEGMKCNRLAIHVQHLLNTPIMLIDKIEDAPLWSEEISDDGFFEAINGKKFSHVCTAPVKYDPKWSSDKDVAFIVTGAQLHVKKHDSRSVLHLRLMFSKVSNFVVVKSSWTQGSSGLSQRSGIFSVISTSISGKDQKKPVVVLDSSVFPTGPPVPVQTQKLLKFVDTSQLCKGPQDSPGHWLVTGARLVLDKGKICLWAKFSLLNTGS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03656 607 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 20 604 IPR044663 GO:0006952|GO:0012501|GO:2000031
Phco4g03656 607 Pfam MAC/Perforin domain 117 326 IPR020864 -
Phco4g03656 607 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 14 340 IPR020864 -
Phco4g03656 607 SMART MACPF_8 143 328 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03656 Phco-Chr4 56261195 56268556 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03656 4 56261195 56268556 Phco4g03656 4 56261195 56268556 ECH