Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03648 ATGGGCTTGGAGGCCCGTTCTCTTGGGCCTCATCCAACTACGGCGGGCCCTTTCGTTTGCTTTTCTATTTTTAACGAACTTCTTTTGCTTTACTTAACCCACATAGGAACGTGTGAAGTGACCATTTGCCCCATCACATCGCACGAAATAAAGAACCGTTTGGTTGATGCCCATCGTTTTTCTGTTTATGTTTGTTTCCCCGTTCGAATTTCCCATCTCTTTGGATGCACATTCTGCATCCACCGAAGCGCGTTTCGTCGATCTAAAACCATAAACCCTTCTCTCGTTAGATCTCCTTCCGTTCGTTCCTTCAATCTCTCTTCCGATTCGATCCGATCTATATATTCCGATTCCAAAATGGCCACGATGACGAGCTTGATCGGTCTCATCAATAAGATCCAACGAGCCTGCACCGTTTTGGGCGATTACGGCGGCGAGGGTTTATCGCTTTGGGAAGCTCTTCCCTCCGTTGCCGTCGTCGGTGGCCAGAGTTCGGGAAAATCGTCGGTGCTTGAAAGCGTGGTAGGAAGAGATTTTCTGCCTCGTGGATCTGGTATTGTTACACGGAGACCATTAGTGCTGCAACTTCACAAAACAGACAGTGGGACACAGGAATATGCGGAGTTTCTTCACTTACCGAGAAAGAGATTCACTGACTTCGCTGCTGTGAGGAAGGAAATTGCAGATGAAACAGATCGTATAACTGGGAAGACAAAGCAAATTTCTAACATTCCAATTCAGCTAAGCATTTATTCTCCAAATGTTGTAAATTTAACCCTCATAGATCTTCCTGGGCTGACGAAGGTTGCAGTAGAGGGACAGCAGGAGAGTATTGTTCAAGATATCGAAAACATGGTCCGCTCTTATGTTGAAAAGCCAAATTGCATTATCTTAGCTATCTCTCCCGCAAATCAAGATATTGCCACATCAGATGCCATAAAAATCGCAAGAGAAGTTGACCCTTCAGGTGAAAGAACGTTTGGTGTTGTTACCAAACTTGATCTTATGGATAAAGGAACTAATGCGGTTGATGTTCTCGAGGGAAGGCAATACAGGCTGCAGCATCCATGGGTTGGAATTGTGAACCGTTCACAAGCTGATATTAATAAGAATGTTGACATGATTGCTGCTCGTAGAAAGGAGCGTGAATATTTTGAGACAAGTCCTGAATATGGACATTTGGCACATAAAATGGGATCAGAATATCTTGCTAAGCTTTTATCTCAGCATTTGGAGCAAGTTATCAGGCAGAAGATACCAAGTATCATTGCCTTAATAAATAAGACTATTGATGAGCTAAATGCTGAGCTGGACCGAATTGGCAGGCCAATTGCTGTGGATTCAGGGGCCCAACTATACACTATTTTAGAGATGTGTCGTGCATTTGACAAAGTATTTAAAGAACACCTGGAGGGAGGCCGTGCTGGTGGGGACCGGATATATGGAGTTTTTGATCACCAATTACCAGCTGCTCTAAAAAAGCTCCCTTTCGATCGCCATCTTTCCCTGAAAAATGTCCAGAGAGTTGTCACAGAAGCTGATGGGTATCAGCCCCATCTGATTGCTCCGGAGCAGGGTTATAGAAGACTAATTGAAGGATCTATCGGCTATTTCAAAGGCCCAGCTGAAGCATCCGTGGATGCTGTTCACTTTGTTTTAAAGGAACTTGTACGGAAATCAATTGCAGAAACTGAGGAACTAAAAAGATTTCCCACACTTTCGAATGATATAGCAACTGCTTCAAATGAATCTCTGGAAAAATTCCGAGAAGAAAGCAGGAAGACAGTTACACGGTTGGTTGATATGGAGTCTAGCTATCTAACAGTGGAGTTTTTCAGGAAGATTCATTTTGAACCAGAAAAGAATCCAACTGGACCACCAAATCCAAATCGAAATGGTCCCCCAAATATGGACAGTTATACTGACAATCACCTGCGCAAAATTGGATCAAATGTAAGTTCCTATATCAATATGGTTTGCGATACACTGAAGAATACCATACCCAAGGCCGTGGTTCATTGTCAAGTTAGAGAGGCTAAGCGATCTTTGCTAAACCACTTTTACGTTCAAGTAGGGAGGAAGGAGAAGGAAAAATTAAGTGCTATGTTGGATGAAGATCCATCCCTTATGGAAAGGAGAAATCAAATAGCCAAAAGGCTTGAATTATACAAGCAAGCTAGGGATGATATTGACTCGGTGGCATGGAAATAA 2211 0.4315 MGLEARSLGPHPTTAGPFVCFSIFNELLLLYLTHIGTCEVTICPITSHEIKNRLVDAHRFSVYVCFPVRISHLFGCTFCIHRSAFRRSKTINPSLVRSPSVRSFNLSSDSIRSIYSDSKMATMTSLIGLINKIQRACTVLGDYGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTDSGTQEYAEFLHLPRKRFTDFAAVRKEIADETDRITGKTKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQQESIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKIAREVDPSGERTFGVVTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINKNVDMIAARRKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEQVIRQKIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLEGGRAGGDRIYGVFDHQLPAALKKLPFDRHLSLKNVQRVVTEADGYQPHLIAPEQGYRRLIEGSIGYFKGPAEASVDAVHFVLKELVRKSIAETEELKRFPTLSNDIATASNESLEKFREESRKTVTRLVDMESSYLTVEFFRKIHFEPEKNPTGPPNPNRNGPPNMDSYTDNHLRKIGSNVSSYINMVCDTLKNTIPKAVVHCQVREAKRSLLNHFYVQVGRKEKEKLSAMLDEDPSLMERRNQIAKRLELYKQARDDIDSVAWK 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03648 736 ProSiteProfiles GED domain profile. 645 736 IPR020850 -
Phco4g03648 736 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 151 420 IPR030381 GO:0005525
Phco4g03648 736 Gene3D - 123 429 IPR027417 -
Phco4g03648 736 SMART dynamin_3 123 371 IPR001401 GO:0003924|GO:0005525
Phco4g03648 736 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 180 189 IPR019762 -
Phco4g03648 736 MobiDBLite consensus disorder prediction 618 639 - -
Phco4g03648 736 Pfam Dynamin GTPase effector domain 641 733 IPR003130 GO:0003924|GO:0005525
Phco4g03648 736 PANTHER DYNAMIN 125 733 IPR022812 -
Phco4g03648 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 428 IPR027417 -
Phco4g03648 736 FunFam dynamin-related protein 1E 123 429 - -
Phco4g03648 736 Pfam Dynamin central region 341 608 IPR000375 -
Phco4g03648 736 SMART GED_2 640 733 IPR003130 GO:0003924|GO:0005525
Phco4g03648 736 FunFam Dynamin-related protein 1C 451 713 - -
Phco4g03648 736 PRINTS Dynamin signature 252 269 IPR022812 -
Phco4g03648 736 PRINTS Dynamin signature 321 337 IPR022812 -
Phco4g03648 736 PRINTS Dynamin signature 302 320 IPR022812 -
Phco4g03648 736 PRINTS Dynamin signature 344 363 IPR022812 -
Phco4g03648 736 PRINTS Dynamin signature 154 172 IPR022812 -
Phco4g03648 736 PRINTS Dynamin signature 179 196 IPR022812 -
Phco4g03648 736 CDD DLP_1 154 420 IPR001401 GO:0003924|GO:0005525
Phco4g03648 736 Gene3D Dynamin, middle domain 453 713 - -
Phco4g03648 736 Pfam Dynamin family 157 332 IPR045063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03648 Phco-Chr4 56211536 56220012 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03648 4 56211536 56220012 Phco4g03648 4 56211536 56220012 ECH