Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03643 ATGTCATCGCCAAACTCCGCCCCTCAGCCCCACGCGCCGCTTCTTGTCCCGCGTCCCGATGCCGCCGCGGCCCGTCTCCCTGTCCTCGCACTCCTCCTCGGCCGCCGCGGCCACTCCGCCGTCGTCCGGGAGACTGCGGCCCGTGAGCTCGAGGAGCGCCGCGCCGACTGGACATACTCGAAGCCGGTGGTGGCGCTCGACGTGACGTGGAACATGGCCTTCGTGGTGGTCTCGGCGGTGATGCTCGCCTGCACCGTCAAGGAGAAGCCCAACATGCCGATCCGGTGGTGGATCTGCGGCTACGCGCTGCAGTGCCTCGTCCACGTTGCGCTGGTGTGGCTCGAGTACCGGAGGAGGAGCGACGTGCCCCGGGACGAAGAGTCCGGCGGCCACCTCGAATACGATGACGTCAACGACAGCGACGAGGAGGATGTTGGATCCTCCGGGAGTTCCTTTTCCACTGGATTCACAAAACGATGCACATCATTGAATACCATGGTTTCGTTACTTTGGTGGATGGTGGGCTTTTACTGGGTTGTCTCTGGTGGTGATGTTCTTCTGCAAGATGCTCCACGTTTGTACTGGTTGGCTGTTGTCTTTCTTGCATTTGATGTCTTCTTTGCCATCTTTTGTGTTGTCTTGGCATGCTTGATTGGAATTGCCCTCTGTTGTTGTTTACCCTGTATTATTGCTATTCTCTATGCTGTTGCAGGACAGGAGGGTGCATCAGAATCGGATCTCAGTGTACTTCCGAAATACAGATTTCAAATGATAAGCAATGAGGAAACTCCTAGTAAGGGAGGTGGATCAATGATTCCTGTGGAGACCATCAATGGTTACTCAGTGAATGAACGAATACTTTCACCCGATGATGCAGAATGTTGTATATGCATATCTTCTTATGAGGATGGAGCAGAACTTCATGTTCTTCCATGTAACCATCATTTCCATTCTACATGTATAGTGAAATGGCTAAAGATGAATGCAACTTGTCCTCTTTGCAAGTTCAATATTCTGAAGGGAAATGAACAGGTGTGA 1038 0.5289 MSSPNSAPQPHAPLLVPRPDAAAARLPVLALLLGRRGHSAVVRETAARELEERRADWTYSKPVVALDVTWNMAFVVVSAVMLACTVKEKPNMPIRWWICGYALQCLVHVALVWLEYRRRSDVPRDEESGGHLEYDDVNDSDEEDVGSSGSSFSTGFTKRCTSLNTMVSLLWWMVGFYWVVSGGDVLLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSVLPKYRFQMISNEETPSKGGGSMIPVETINGYSVNERILSPDDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKFNILKGNEQV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03643 345 CDD RING-H2_PA-TM-RING 293 335 - -
Phco4g03643 345 ProSiteProfiles Zinc finger RING-type profile. 294 335 IPR001841 -
Phco4g03643 345 PANTHER TARGET OF ERK KINASE MPK-1 34 343 - -
Phco4g03643 345 MobiDBLite consensus disorder prediction 123 153 - -
Phco4g03643 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 343 IPR013083 -
Phco4g03643 345 FunFam E3 ubiquitin protein ligase RIE1 274 342 - -
Phco4g03643 345 Pfam Ring finger domain 293 335 IPR001841 -
Phco4g03643 345 SMART ring_2 294 334 IPR001841 -
Phco4g03643 345 SUPERFAMILY RING/U-box 284 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03643 Phco-Chr4 56191838 56194829 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03643 4 56191838 56194829 Phco4g03643 4 56191838 56194829 ECH