Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03641 ATGATGTCGTGGGAAGACGAGATTGTGATGCGCGATGTCACGAATGCGGGGCTTGTTGTCAGCGATCGCATTGGTCGCGAAGTTTCCTCTCAGCTCGACCTCGAAGAAGCTCTGGAAGCTTCCAGATACACCAGCCACCCTTATTCCACTCACCCCCGAGAGTGGCCCCCTTCTGTTGAGGTAGTGAATACCTGGGAGTTGCCTCCTGTGCTCATCGAAAGATACAATGCAGCTGGTGGGGAAGGAACTGCTTTTTGTGGAATATTTCCAGAAATACGGAGGGCATGGGCGTCTGTGGACAATTCATTGTTTCTTTGGCGTTTTGACAAGTGGGATGGCCAATGTCCTGAATTTAGTGGGGAGGAGCAAGCCATTTGTGCAGTTGGTCTTGCAAAATCAAAACCTGGTGTTTTTGTTGAAGCCATCCAATATCTTTTAGTTTTGGCAACACCTGTTGAGTTAATTTTAGTTGGAGTTTGTTGCTCTGGAGGAGCAGATGGTTCAGATCCGTTCGCAGAAGTTACATTGCAGCCTTTGCCAGAGCATACAATATCATCTGATGGGGTTACAATGACTTGTGTAGCATGTACTGACAAGGGTCGCATTTTTCTTGCTGGTCGGGATGGCCACATATATGAGGTTCTTTATTCAACTGGCTCTGGATGGCAAAAACGCTGCCGGAAAATCTGCATCACTGCTGGTTTTGGGAGTGTAATTTCAAGATGGGTTATACCAAATGTATTCAATTTTGGAGCTGTTGACGCCATCGTTGAAATGGTTTTCGACAGTGAGAGACAAATATTGTATGCACGGACTGAAGAGATGAAGATTCAAGTTTATGTTATAGGACCAAATGGTGATGGGCCGTTAAAGAAAGTAGCCGAAGAAAAAAATCTTGTCAATCAGAGGGATGCACATTATGGAGCTAGACAATCAACAGGATCAAGAGTCTCAAGTCGATCTCCAAAGCCATCTATTGTTTGCATCTCACCTTTATCTACACTTGAATCAAAGTGGCTACATCTTGTTGCTGTTCTATCAGATGGTAGAAGGATGTACCTATCTACCTCTCCTTCTAGTGGAAGCTTGACTGGATTTAACACCAATCATCACAAGCCTAGCTGTTTAAAGGTTGTCACTACAAGGCCTGCCCCTCCTTGGGGTGTTAGTGGAGGTCTAACCTTTGGAGCAATGGCTCTTGGTGGTAGACCCCAGAATGAGGATCTCTCCCTGAAAATTGAGGCATCTTATTATTCTGCTGGAACTCTTATCCTCTCTGATGCATCATCTTCGACCATGCCTTCCCTTCTTGTTTTGAGCAGGGATTCAAGCACACAGTCACTGCCATCAGGTAATTTAGGAACAGGTACCAGGAGTTCCCGGGCATTACGGGAGTCTGTATCTTCTTTACCAGTTGAAGGACGAATGCTTTCAGTGGCAGATGTTTTACCATTGCCAGATACTGCAGCTACTGTGCAGTCTCTATATTCAGAAATTGAATTTGGTGGTTATGAGAGCTCTATGGAATCATGTGAAAAGGTGTCTGGCAAACTCTGGGCTAGGGGAGATCTCTCAACCCAACATATACTGCCAAGAAGAAGGATTGTTGTCTTCAGCACCATGGGCATGATGGAAATTGTTTTTAACAGGCCACTGGACATTCTAAGGCGGCTATTGGAATCCAACACTCCTAGGTCAGTTTTAGAAGATTTCTTCAATCGTTTTGGTGCAGGTGAGGCTGCTGCAATGTGTTTAATGCTAGCTGCAAGAGTAGTGCATTCTGAAAACCTTATCAGCAACGTTATTGCTGAGAAAGCAGCTGAAGCTTTTGAGGACCCAAGAGTTGTTGGCATGCCACAACTTGAGGGTAGTAATGCTTTATCAAACACAAGAAGTGCTGCTGGTGGATTTAGCATGGGCCAGGTTGTTCAGGAAGCTGAGCCTGTTTTTTCAGCTGCACATGAAGGGCTGTGTTTGTGTTCATCTAGATTACTTTTTCCCCTGTGGGAACTTCCTGTAATGGTTGTAAAAGGAAACTTAGGTCCTTCAGGCACCCTAACTGAAAATGGGGTAGTTGTGTGCAGACTCTCTGTTGGGGCTATGCAAGTCCTTGAACAGAAACTCCGATCTTTGGAGAAATTCTTAAGATCAAGAAGGAACCAGAGGAGGGGACTTTATGGCTGTGTAGCAGGATTAGGAGATCTGAGCGGTTCCATTCTGTATGGTAATGGTTCGACACTAGGTGCTGGTGATCGCAATATGGTCAGAAACTTATTTGGTGCTTATTCCAGAAATATGGAGTCCAATGGTAACAGAACAACTAATAAAAGGCAAAGGTTGCCTTATAGTCCTGCTGAATTAGCTGCCATGGAGGTGAGAGCAATGGAGTGCATTAGGCAGTTGCTCCTTAGATCTGGTGAAGCCCTATTTTTGCTTCAACTTCTTTCACAGCATCATGTGACTCGATTAATTCATGGATTTGACTCTAGCCTTCAACAAACATTAGTTCAGTTGACATTTCATCAACTAGTTTGTTCTGAGGAGGGTGACCAACTTGCTACAAGACTTATATCTGCTCTCATGGAGTATTATACTGGTCCTGATGGCAGGGGGACTGTAGATGACATTAGTAGGAGACTGCGAGATGGCTGTCCAAGTTACTATAAGGAGTCTGATTACAAATTCTTCTTAGCTGTGGAAGCTCTGGAGAGAGCTGCTACGACTATAGATTCCGAAGATAAGGAGAATCTTGCGAGGGAAGCATTTAATTCATTGAGTAAAGTTCCAGAATCTGTAGACTTACGAACTGTTTGCAAACGTTTTGAGGATTTAAGATTTTATGAAGCCGTAGTGCGCTTACCTCTTCAAAAGGCACAGGCTCTTGACCCTGCAGGTGATGCTTATAATGATGAAATTGATGCACCTGTCAGAGAACAAGCACTTGCTCACCGTGAGCAGTGTTATGAGATAATTATCAGTGCTTTGCGATCTCTGAAAGGTGACACCTTGCAGAAGGAATTTGGCTCTCCCATTAGATCATCTGTTTCACAATCTGCTCTTGATCCATCCTCAAGGAAGAAATATATATGTCAAATTGTTCAGCTGGGTGTCCAATCTCCCGACAGGATTTTCCATGAGTATCTTTACCAGGCTATGATTGATGTAGGTCTTGAAAATGAATTGCTAGAGTATGGGGGTCCTGACCTATTGCCATTTTTGCAAAGTGCTGGTCGTAAACCTATACACGAGGTTCGTGCTGTCACTGCGACAACTTCTCCAATGGGGCAATCAGGAGCACCAATGTCAACTAATCAAGTCAAGTACTATGAACTTCTGGCACGATATTATGTCTTGAAACGCCAACATATGCTTGCAGCTCATGCACTGCTTAGACTTGCTGAAAGGCGTTCTATTGACGGAGTTCCTACACTCGAACAGAGGTGTCAATACCTAAGTAATGCAGTGCTACAGGCCAAAAATGCAACTAATAGTGATGGGTTACTAGGTTCTGGTCGAAGTTCCATTGACAGTGGGTTCCTAGATTTGCTTGAAGGGAAGCTTGCAGTTCTCCGGTTCCAGATAAAAATCAAAGAAGAACTGGAGTCTATGGCTTCCAGGTCTGATGTTTTACCTAGCACATCAGGTTCTACCGAAAATGGTGTAATCCCTGAGGGTAGCTCTACTGATGCTGATTTTGTAAATTCAACAAGAGAGAAGGCAGAAGAGCTAGCTTCAGATGTGAAGAGCATTACCCAGTTGTATAATGAATATGCTGTTCCCCTTGGGCTCTGGGAGATATGCCTGGAGATGCTGTACTTTGCCAATTATTCTGGTGACACCAACAGCAGCATTGTCAGAGAGACGTGGGCTAGACTTATTGATCAAGCTATATCAAGAGGGGGCATTGCTGAAGCTTGCTCAGTACTAAAAAGGGTTGGGCCCCGCCTTTATCCTGGTGATGGAGCTGTTTTACCACTTGACATTATTTGTCTTCACCTAGAGAAGGCTGGACTGGAGAGGTTGAATTCAGGGGTCGAAGCTGTTGGAGATGAAGATGTTGCAAGAGCCCTTGTTTCTGCTTGTAAGGGTGCAGCTGAACCTGTATTGAATGCATATGACCAATTGTTATCGAATGGGGCTATTTTGCCATCCCCTAGTGTTAGATTGCGTATGTTGAGATCGGTTCTAGTAGTACTTCGAGAGTGGGCAATGTCTGTATATTCACAAAGGATCGGTAGCAGTGCTGCTGGGCATTCCTCCCTAATACTAGGTGGAGGATTCTCATCGGAACGTGCTGTCGCTAGCCAAGGAATTCGGGACAAGATCACAAGTGCTGCAAACAGGTATATGACTGAAGTACGCAGGTTAGCCCTTCCACAGAACCAAACAGAACACGTCTACCGAGGTTTCAGAGAACTTGAAGAATCGTTTATAAGCCAACATTCATTTGATCGATTTTGA 4461 0.4445 MMSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYTSHPYSTHPREWPPSVEVVNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEFSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGADGSDPFAEVTLQPLPEHTISSDGVTMTCVACTDKGRIFLAGRDGHIYEVLYSTGSGWQKRCRKICITAGFGSVISRWVIPNVFNFGAVDAIVEMVFDSERQILYARTEEMKIQVYVIGPNGDGPLKKVAEEKNLVNQRDAHYGARQSTGSRVSSRSPKPSIVCISPLSTLESKWLHLVAVLSDGRRMYLSTSPSSGSLTGFNTNHHKPSCLKVVTTRPAPPWGVSGGLTFGAMALGGRPQNEDLSLKIEASYYSAGTLILSDASSSTMPSLLVLSRDSSTQSLPSGNLGTGTRSSRALRESVSSLPVEGRMLSVADVLPLPDTAATVQSLYSEIEFGGYESSMESCEKVSGKLWARGDLSTQHILPRRRIVVFSTMGMMEIVFNRPLDILRRLLESNTPRSVLEDFFNRFGAGEAAAMCLMLAARVVHSENLISNVIAEKAAEAFEDPRVVGMPQLEGSNALSNTRSAAGGFSMGQVVQEAEPVFSAAHEGLCLCSSRLLFPLWELPVMVVKGNLGPSGTLTENGVVVCRLSVGAMQVLEQKLRSLEKFLRSRRNQRRGLYGCVAGLGDLSGSILYGNGSTLGAGDRNMVRNLFGAYSRNMESNGNRTTNKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIHGFDSSLQQTLVQLTFHQLVCSEEGDQLATRLISALMEYYTGPDGRGTVDDISRRLRDGCPSYYKESDYKFFLAVEALERAATTIDSEDKENLAREAFNSLSKVPESVDLRTVCKRFEDLRFYEAVVRLPLQKAQALDPAGDAYNDEIDAPVREQALAHREQCYEIIISALRSLKGDTLQKEFGSPIRSSVSQSALDPSSRKKYICQIVQLGVQSPDRIFHEYLYQAMIDVGLENELLEYGGPDLLPFLQSAGRKPIHEVRAVTATTSPMGQSGAPMSTNQVKYYELLARYYVLKRQHMLAAHALLRLAERRSIDGVPTLEQRCQYLSNAVLQAKNATNSDGLLGSGRSSIDSGFLDLLEGKLAVLRFQIKIKEELESMASRSDVLPSTSGSTENGVIPEGSSTDADFVNSTREKAEELASDVKSITQLYNEYAVPLGLWEICLEMLYFANYSGDTNSSIVRETWARLIDQAISRGGIAEACSVLKRVGPRLYPGDGAVLPLDIICLHLEKAGLERLNSGVEAVGDEDVARALVSACKGAAEPVLNAYDQLLSNGAILPSPSVRLRMLRSVLVVLREWAMSVYSQRIGSSAAGHSSLILGGGFSSERAVASQGIRDKITSAANRYMTEVRRLALPQNQTEHVYRGFRELEESFISQHSFDRF 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03641 1486 FunFam Nuclear pore complex protein NUP155 1181 1416 - -
Phco4g03641 1486 Gene3D - 532 884 - -
Phco4g03641 1486 Gene3D Nucleoporin, helical domain, central subdomain 1058 1155 IPR042537 -
Phco4g03641 1486 FunFam Nuclear pore complex protein NUP155 895 1055 - -
Phco4g03641 1486 MobiDBLite consensus disorder prediction 1207 1231 - -
Phco4g03641 1486 Gene3D - 1181 1420 IPR042538 -
Phco4g03641 1486 Pfam Non-repetitive/WGA-negative nucleoporin C-terminal 876 1292 IPR007187 -
Phco4g03641 1486 Coils Coil 701 721 - -
Phco4g03641 1486 Gene3D - 895 1055 IPR042533 -
Phco4g03641 1486 FunFam Nuclear pore complex protein NUP155 1058 1155 - -
Phco4g03641 1486 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 13 1478 IPR004870 GO:0005643|GO:0006913|GO:0017056
Phco4g03641 1486 Pfam Nup133 N terminal like 55 544 IPR014908 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03641 4 56161239 56170957 Phco4g03641 4 56161239 56170957 ECH