Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03640 ATGGCCGACGCTCTCTCGCTGATTCCGGCAGCCGTGCTTCGCAACCTTGCTGACAAGCTCTACGAGAAGCGTAAAAATGCTGCTCTTGATATTGAGGGGATAGTGAAGCAGCTAGCTACTGCTGGGGATCATGATAAAATAACGGCTGTTATCAATTTGTTGACTACGGAATTTACTTATTCACCACAAGCCAATCACCGGAAGGGAGGATTGATAGGATTAGCAGCTGCAACTGTTGGGTTGACTTCTGAAGCAGCTCAGCATCTTGAGCAAATTGTGCCCCCTGTGTTAAATTCTTTCTCTGACCAAGATAGCAGAGTTCGCTATTATGCTTGCGAAGCACTTTATAACATTGCCAAGGTTGTGAGAGGGGATTTTATTATTTTCTTCAACCAGATCTTTGATGCGCTATGCAAACTTTCAGCAGACTCAGATGCCAACGTACAGAGTGCTGCTCACCTCTTAGATAGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCACTGTTGAGGGAGCGCATGAATGTTTTGAATCCATATGTCCGTCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGACATGCTGGGATTTCTTCCTGATTTTCTTGATGGCTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCGGAGTTTCTTCAAGAGATTAAAAACTCCCCATCTGTAGATTATGGTCGCATGGCTGAAATCCTGGTACAGAGGGCTGGTTCTCCGGATGAATTTACTAGGCTAACAGCTATCACATGGATAAATGAATTTGTAAAGCTTGGTGGAGACCAGCTTGTTCCATACTATGCTGACATTCTTGGAGCCATTTTGCCTTGTATATCAGATAAAGAAGATAAAATCAGAGTTGTTGCTCGTGAAACCAATGAAGAGCTACGTGCCCTCAAAGCGGATCCTGCTGAAGCGTTTGATGTAGGAGCAATCCTCTCCATTGCCAGGAGGCAATTATCTAGTGAATCGGAGGGTACTCGAATTGAAGCTTTGCACTGGATGTCAACCCTCTTAAACAAATATCGTAACGAGGTTTTACAATATCTGAATGACATATTTGACACCCTGCTCAAAGCACTTTCAGATCCATCTGATCAGGTTGTTCTTCTTGTTCTTGATGTTCATGCATGCATAGCAAAAGATCCTCAGCATTTTCGGCAACTTGTTGTTTTCTTGATGCACAATTTCCGGGTAGACAATTCCCTTTTGGAGAAACGTGGTGCTTTGATAATTCGCCGGCTTTGTGTGCTTTTGAATGCTGAGAGAGTCTACCGTGAACTTTCCACTATACTAGAAGGGGAGTCTGACCTGGATTTTGCTTCAATTATGGTCCAGGCTCTGAATTTGATATTACTCACATCATCAGAACTATCCGAGATTCGATATCTTTTGAAGCAATCACTGGTTGATCCTGCTGGGAAGGATTTATATGTTTCTTTGTATGCCTCGTGGTGTCATTCTCCAATGGCAATTATAAGTCTCTGCTTATTAGCTCAGGCTTACCAACATGCGAGTTCTGTGATCCAGTCTCTGGTTGAAGAGGATGTTAATGTCAAATTCTTAGTCCAGCTTGATAAATTGATTCGCTTGCTGGAAACTCCAATATTTGCTTATCTAAGATTGCAGCTTCTCGAACCTGGAAGATATCCATGGCTGTTTAAAGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGATTCTCAAAACTCGCTTAAAAGCTGTGCCATCGTATTCCTTCAACGGTGAGCAATTGAAAAAAACATCCTCAGGGAATCCCTATCATTTTCTCCATAACATGTCTGGTGGATCTCAAATCAGTGAGGATGGTGACATGGCTTTGGATCGTGGGAACTCACTCAATGGGATAAATTTTTCTGCAAGGTTACAACAGTTTCAGCAAATGCAGCACCAACATCGTGTGCATTTTAAAATACAGACGTCCAAAAATTTCTCCTCCTCATCAAAGGAAGCACAGAGACTTGAAGAGCCAAAGCGACCTCAGTTGAGTGAGGTTAATGTTGTTGCTCCTTCACGATCATCTAAAAGAGCCCAGGGTAGCTAG 2163 0.4235 MADALSLIPAAVLRNLADKLYEKRKNAALDIEGIVKQLATAGDHDKITAVINLLTTEFTYSPQANHRKGGLIGLAAATVGLTSEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEDKIRVVARETNEELRALKADPAEAFDVGAILSIARRQLSSESEGTRIEALHWMSTLLNKYRNEVLQYLNDIFDTLLKALSDPSDQVVLLVLDVHACIAKDPQHFRQLVVFLMHNFRVDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRYLLKQSLVDPAGKDLYVSLYASWCHSPMAIISLCLLAQAYQHASSVIQSLVEEDVNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYPWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKKTSSGNPYHFLHNMSGGSQISEDGDMALDRGNSLNGINFSARLQQFQQMQHQHRVHFKIQTSKNFSSSSKEAQRLEEPKRPQLSEVNVVAPSRSSKRAQGS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03640 720 Gene3D - 251 479 IPR011989 -
Phco4g03640 720 PANTHER TAX1 BINDING PROTEIN-RELATED 7 689 IPR026825 GO:0006661|GO:0070772
Phco4g03640 720 FunFam protein VAC14 homolog 126 248 - -
Phco4g03640 720 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Phco4g03640 720 SUPERFAMILY ARM repeat 3 563 IPR016024 -
Phco4g03640 720 MobiDBLite consensus disorder prediction 706 720 - -
Phco4g03640 720 FunFam protein VAC14 homolog isoform X1 249 410 - -
Phco4g03640 720 FunFam ARM repeat superfamily protein 7 125 - -
Phco4g03640 720 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Phco4g03640 720 Gene3D - 1 250 IPR011989 -
Phco4g03640 720 MobiDBLite consensus disorder prediction 678 720 - -
Phco4g03640 720 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03640 Phco-Chr4 56150967 56159554 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03640 4 56150967 56159554 Phco4g03640 4 56150967 56159554 ECH