Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03639 ATGATGGAGTCAAACGGTGTGCGGTTCTTAGCGTACCAATCAATATTTTTGAGTGTTGGATCTGGGGACTTTGATGGGGTGAAGAAACTGGTGGAGAAAGTGAAGAACGAAGAAGAGTCACCGCTCTCTGATGTGATGTCTCTTCAGAACGATGCTGGAGAGACTGCACTTTACATCGCTGCAGAGAATAATCTGCAAGAGATTTTCAGCTACTTGCTCAACTTTTGTGACTTCGAAGCCGTCAAGATTCGCTCCAAGTCTGATATGAACGCCTTTCATGTTGCTGCCAAACGTGGCCATCTAGATATTGTGAAGGAGCTTTTGAATGCTTGGCCTGAGCTCTGCAAGTTATGCGACTCCTCAAACACCAGTCCTCTATATTCTGCTGCAGTTCAAGACCACTTGGATGTGGTGAATGCTATCTTGGATGTTGATGTCAGTTCAATGTTTATTGTTAGGAAAAACGGAAAAACTTCATTGCACAATGCTGCTCGGTATGGCGTGGTTCGCATTGTAAAAGCAGTTATTGCTAGGGATCCAGGAATAGTATGCATAAAAGATAAAAAAGGTCAAACTGCACTTCATATGGCTGTCAAAGGACAGTGTACTTTAGTAGTGGAGGAGATATTACTAGCTGATTCTTCTATATTGAATGAGCGAGATAAAAAGGGTAATACAGCCCTTCACATGGCTACAAGGAAATGCCGTTCACAGATAGTGATCCTTTTGCTAAGCTATTCTGCAATGGATGTTAATGCCATCAACAAGCAGCAGGAAACAGCCTTGGACTTGGCAGATAAACTGCCGTATGGAGATTCAGCTTTGGAAATCCAGGAATCCCTTGCAGAATACGGAGCTAAGCATGCCAGGCATGTCGGCAAAGTAGATGAAGCCATGGAGCTTAAAAGAACCGTGAGTGACATAAAGCATGAGGTGCAGTCTCAACTTATACAAAATGAAACGACTCGTCGACGGGTTTCTGGAATTGCCAAGGAACTGAAGAAACTTCATAGAGAGGCAGTTCAAAACACCATTAATTCAGTCACAGTGGTTGCTGTCCTTTTTGCCTCAATAGCCTTCTTGGCCATCTTCAATTTGCCGGGTCAATATCAAGTGCAACCCGGGGAAGAGATTGGAAAAGCTAATATAGCCGATCATCTTAGTTTCCAAGTTTTCTGCTTTCTGAATTCTACATCCCTTTTCATTTCTCTTGCAGTTGTGGTAGTTCAGATCACTTTGGTAGCCTGGGACACAAGGGCTCAAAAGCAGATTGTGTCAGTGGTTAACAAGCTGATGTGGGCTGCATGTGCTTGCACTTGTGGTGCTTTTCTAGCAATAGCTTTTGAGGTTGTTGGAGGGAAAACATGGATGGCTATCACCATAACCCTTTTGGGAGTACCTATTCTAGTAGGGACTCTATTAAGCATGTGCTACTTTGTTTTTCGACAACATTTCGGTATATTCCGCAGTGATTCCCAGAGACGCATCAAGAGAGCAAGTGGAAGCAAATCTTTTTCATGGTCTTACTCTGCAAATATATCAGACTTGGATGAATACGATTCTGACATTGAGAAGATCTATGCCCTGTGA 1590 0.4314 MMESNGVRFLAYQSIFLSVGSGDFDGVKKLVEKVKNEEESPLSDVMSLQNDAGETALYIAAENNLQEIFSYLLNFCDFEAVKIRSKSDMNAFHVAAKRGHLDIVKELLNAWPELCKLCDSSNTSPLYSAAVQDHLDVVNAILDVDVSSMFIVRKNGKTSLHNAARYGVVRIVKAVIARDPGIVCIKDKKGQTALHMAVKGQCTLVVEEILLADSSILNERDKKGNTALHMATRKCRSQIVILLLSYSAMDVNAINKQQETALDLADKLPYGDSALEIQESLAEYGAKHARHVGKVDEAMELKRTVSDIKHEVQSQLIQNETTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYQVQPGEEIGKANIADHLSFQVFCFLNSTSLFISLAVVVVQITLVAWDTRAQKQIVSVVNKLMWAACACTCGAFLAIAFEVVGGKTWMAITITLLGVPILVGTLLSMCYFVFRQHFGIFRSDSQRRIKRASGSKSFSWSYSANISDLDEYDSDIEKIYAL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03639 529 Gene3D - 150 307 IPR036770 -
Phco4g03639 529 ProSiteProfiles Ankyrin repeat profile. 223 256 IPR002110 GO:0005515
Phco4g03639 529 Pfam Ankyrin repeats (3 copies) 20 109 IPR002110 GO:0005515
Phco4g03639 529 Pfam Ankyrin repeats (3 copies) 187 253 IPR002110 GO:0005515
Phco4g03639 529 Pfam Domain of unknown function 339 447 IPR026961 -
Phco4g03639 529 SMART ANK_2a 52 80 IPR002110 GO:0005515
Phco4g03639 529 SMART ANK_2a 189 218 IPR002110 GO:0005515
Phco4g03639 529 SMART ANK_2a 223 253 IPR002110 GO:0005515
Phco4g03639 529 SMART ANK_2a 121 151 IPR002110 GO:0005515
Phco4g03639 529 SMART ANK_2a 155 184 IPR002110 GO:0005515
Phco4g03639 529 SMART ANK_2a 87 116 IPR002110 GO:0005515
Phco4g03639 529 Gene3D - 11 149 IPR036770 -
Phco4g03639 529 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 21 508 - -
Phco4g03639 529 ProSiteProfiles Ankyrin repeat region circular profile. 223 248 - -
Phco4g03639 529 SUPERFAMILY Ankyrin repeat 15 284 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03639 Phco-Chr4 56147570 56150024 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03639 4 56147570 56150024 Phco4g03639 4 56147570 56150024 ECH