Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03634 ATGGCCTGTTTGGTGTCTCGCTCAGGAAGGGAACTGCAGAGGTACAACAACATGGGTGGCCGCCAAGTTGTTGGGTGCATACCTTACAGATATAAAGAAGACGTAGATGGTAACATGAGTGACGAATTGGAAGTTCTAGTGGTTAGTTCTCAGAAAGGCCAAGGATTGATGTTCCCTAAGGGAGGTTGGGAACTTGATGAATCTGTAGAAGAAGCAGCTTGTAGGGAATCCCTTGAAGAAGCAGGAGTATTGGGAAGTATTGAGCATGAATTGGGGCAATGGAACTTCATCAGCAAAAGATATGGCGTATACTATGAAGGACACATGTTCCCCATGTTTGTCAAGGAACAACTTGACACGTGGCCAGAACAAAATTTACGGAGAAGAATATGGATGAGTGTTGGTGAAGCTAGAGAAGTTTGTCAGCATTGGTGGATGAAGGAGGCATTAGATATATTGGTTCAAAGAATGGTGTCTTCAGCACAGGAAAAAGATTTAAGCTTTTAA 507 0.432 MACLVSRSGRELQRYNNMGGRQVVGCIPYRYKEDVDGNMSDELEVLVVSSQKGQGLMFPKGGWELDESVEEAACRESLEEAGVLGSIEHELGQWNFISKRYGVYYEGHMFPMFVKEQLDTWPEQNLRRRIWMSVGEAREVCQHWWMKEALDILVQRMVSSAQEKDLSF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03634 168 FunFam Nudix hydrolase 17, mitochondrial 5 156 - -
Phco4g03634 168 SUPERFAMILY Nudix 14 155 IPR015797 -
Phco4g03634 168 CDD Nudix_Hydrolase_9 22 147 IPR047198 GO:0016462
Phco4g03634 168 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 158 - -
Phco4g03634 168 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Phco4g03634 168 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 157 - -
Phco4g03634 168 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
Phco4g03634 168 Pfam NUDIX domain 43 139 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03634 Phco-Chr4 56124932 56125983 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03634 4 56124932 56125983 Phco4g03634 4 56124932 56125983 ECH