Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03624 ATGGGAGACATGAAAGACAAGGTTAAAGGGTTCATGAAGAAAGTGAACAACCCTTTCTCCTCTTCATCATCTGGAAAGTTCAAGGGCCAAGGTAGAGTCCTCGGTTCTTCTTCTACACCCGCCAATTCCAATCCTACCCCTCGCCCCATTCCTTCTCTCAACCCTAATTCCAAACCCTCTTCATCCAATCCCAAACTCACTTCAACCAGTCCCAAACCCTCGCCCCACGATAGGGAGCCCAATAGAAGCACCGAGAAGCCTCGCAAAGATGGTGATGGGTTTGACCCGTTTGATTCTTTGGTCACTAATTCCAACAGATCGCGGAACGGGTATTCACTGAACGTGTATGAATGTCCCGTTTGTAAACAACCCTTCGGATCCGAAGAAGCTGTGTCTGAACACGTGGATGGTTGTTTGAGCAACCTTGTTGAGCGTGAGCCTATAGGTGATGATGGAAATGGGGTTTCAGAGGGTGAGGGTGGGTCTAACGCTAATGGTGAATTGGAGGTCTGTGTTGGGACATACATTTCAGGGAATCCATCTGAGGGATCGGTTGATATTGTTCTCAAACTTTTGAGGAATATTGGTAGGGAACCTGAGAATGTGAAGTTTAGGAGGATCAGGTTGAATAATCCCAAGATAAAAGAGGCTGTTGGTGATATTGCTGGGGGAGTTGAGTTGCTCAGTTTTCTGGGGTTTGAACTCAGGGAGGAGAATGGAGAGACATGGGCAGTGATGGAGGTTCCCAGAGAGGAGCAGATAAAATTCATCAAGGAGGCAATTGCGTTACTGGAATCACAACTTGTGCAACAACAAGGACCTCCAAAGGGAGAGGACTCGGCGTCTGCAAATTCTGCGCAGAGGGGTGCGAAAGCCGAGCCAAAGCCAGTCGACAGACAGGTGAAGGTCTTCTTTGCTGTCCCTGAAAGTGTTGCAGCTAAAATTGAGCTACCAGATTCCTTCTATAAGCTTTCAGCGGAAGAGGTGAGAAGAGAAGCTGATTTAAGGAGAAAAAAGATTGCTGATTCTCAGCTTTTGATCCCGAAGTCACTTAAAGAAAAACAAGCAAAAGCCTCCAGGAAGAGATACACAAAAACTATTATTAGGATTCAATTTCCCGATGGAGTTGTACTTCAAGCCGTATTTGCTCCATGGGAACCAACCACGGCTCTCTATAAGTTTGTCAGCTCAGCACTAAAAGAACCAGGTTTGGAATTTGACCTAATGCATCCTGTAGTTGTCCAACGGCGTGTGATCCCTCATTTTCCAAAAGCAGGGGAAAATGCTAAAACAATAGAGGAAGAGGACCTGGTACCTTCAGCTTTAATTAAGTTCAAGCCCTTGGAAACAGATTCTGTTGTTTTCACCGGTCTCAAAAATGAATTGCTTGAAATCAGTGAACCACTTGTTAATGGTTAA 1419 0.456 MGDMKDKVKGFMKKVNNPFSSSSSGKFKGQGRVLGSSSTPANSNPTPRPIPSLNPNSKPSSSNPKLTSTSPKPSPHDREPNRSTEKPRKDGDGFDPFDSLVTNSNRSRNGYSLNVYECPVCKQPFGSEEAVSEHVDGCLSNLVEREPIGDDGNGVSEGEGGSNANGELEVCVGTYISGNPSEGSVDIVLKLLRNIGREPENVKFRRIRLNNPKIKEAVGDIAGGVELLSFLGFELREENGETWAVMEVPREEQIKFIKEAIALLESQLVQQQGPPKGEDSASANSAQRGAKAEPKPVDRQVKVFFAVPESVAAKIELPDSFYKLSAEEVRREADLRRKKIADSQLLIPKSLKEKQAKASRKRYTKTIIRIQFPDGVVLQAVFAPWEPTTALYKFVSSALKEPGLEFDLMHPVVVQRRVIPHFPKAGENAKTIEEEDLVPSALIKFKPLETDSVVFTGLKNELLEISEPLVNG 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03624 472 MobiDBLite consensus disorder prediction 272 287 - -
Phco4g03624 472 Pfam PUB domain 182 256 IPR018997 -
Phco4g03624 472 Pfam UBX domain 362 412 IPR001012 GO:0005515
Phco4g03624 472 CDD PUB 181 261 - -
Phco4g03624 472 MobiDBLite consensus disorder prediction 75 95 - -
Phco4g03624 472 SMART PGNneu 183 250 - -
Phco4g03624 472 MobiDBLite consensus disorder prediction 272 295 - -
Phco4g03624 472 MobiDBLite consensus disorder prediction 1 108 - -
Phco4g03624 472 SUPERFAMILY PUG domain-like 180 266 IPR036339 -
Phco4g03624 472 Gene3D - 355 448 - -
Phco4g03624 472 MobiDBLite consensus disorder prediction 55 74 - -
Phco4g03624 472 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 471 - -
Phco4g03624 472 MobiDBLite consensus disorder prediction 15 43 - -
Phco4g03624 472 ProSiteProfiles UBX domain profile. 361 445 IPR001012 GO:0005515
Phco4g03624 472 SUPERFAMILY Ubiquitin-like 337 445 IPR029071 -
Phco4g03624 472 Gene3D - 178 265 - -
Phco4g03624 472 FunFam UBX domain-containing protein 6 355 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03624 Phco-Chr4 56067084 56070717 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03624 4 56067084 56070717 Phco4g03624 4 56067084 56070717 ECH