Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03623 ATGGGCCTAAACTCGAAAGAACCACGAACTCTGGTAAAGGAGGAGATCAACGAGGATAGCTACGAAGACTCTGGCTTCAAAAAAGGTTCCATTGCACAGTGGCCTTTCTCTAACAAAGTATCCGCCCTTCCACATTTGATGCCTTTCAAGGCTTCTCAAGATGATAAGACTAAGAAGATAGTGTCTGGTCCCACAACAGCTGGGCTTTTATCTATCTTAAGTCAAGATGCACTTGAGTCTACTCAGAAATGCTCTGCCGGTGAACCCCAGAAATCTTTCAATCACGATGGGCAAGGTGGTCGTCATTTGTCGATGACTCCATTTCTAGTACAACATGATGCGAATTCTGTGAATCGTCCTCATGGTGTGAAGATGTTTTCAGTTCCCAATCAAGCAATTTCAGTTTCTTTGGGGAGTCCATTCCTGAAGGATCATTTTTCAACTGCTGGTCATAATATGAATGGCACTAGTGTGCAGCCATTACTTGGGGGAATACCTGTTTCTGTGCCCCATTTAGTTATTCCCAACGCTGGCGCTGTTGCTGGAATGATTGAATCATGTGTGAAACCATCTCCGCCTTCTGCCCAACTTACCATCTTCTATGCGGGAACTGTCAAAGTCTTTAATGATATCTCTGCTGAAAAGGCTCAAGCTATCATGTTGTTGGCTGGCAATAGCTTATCAATAGCTCCAAACATGGTCCAGCCAAAAGTTCACGTGCCTGTCTCGAAGTTGGCTGCTGGCGATGGTGTGCCTGCGACTCAACCTGCAAGTACACCACCCGGCTCTGGCCTTTCAAGCCCTATATCCGTTTCTTCACATACTGGGGCACAATCAGGGAGTGGCTCAACCAGCACTGATGAATTTCTGGCTGCTAAAACAACTGGAGTTCCCACCACTCCTATTTGCATTGTGGAGCCTCCAAAGGTAGTCTGCGCAACCACTATGTTGACATCAGCTGTACCTCAGGCTCGGAAAGCATCTTTGGCTAGATTTTTAGAAAAGCGCAAAGAAAGGGTGATGAGTGGAGCACCATATACCCTCAACAAGAAAGACTGA 1059 0.4618 MGLNSKEPRTLVKEEINEDSYEDSGFKKGSIAQWPFSNKVSALPHLMPFKASQDDKTKKIVSGPTTAGLLSILSQDALESTQKCSAGEPQKSFNHDGQGGRHLSMTPFLVQHDANSVNRPHGVKMFSVPNQAISVSLGSPFLKDHFSTAGHNMNGTSVQPLLGGIPVSVPHLVIPNAGAVAGMIESCVKPSPPSAQLTIFYAGTVKVFNDISAEKAQAIMLLAGNSLSIAPNMVQPKVHVPVSKLAAGDGVPATQPASTPPGSGLSSPISVSSHTGAQSGSGSTSTDEFLAAKTTGVPTTPICIVEPPKVVCATTMLTSAVPQARKASLARFLEKRKERVMSGAPYTLNKKD 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03623 352 MobiDBLite consensus disorder prediction 256 287 - -
Phco4g03623 352 Pfam Jas motif 322 346 IPR018467 -
Phco4g03623 352 MobiDBLite consensus disorder prediction 249 287 - -
Phco4g03623 352 SMART tify_2 190 225 IPR010399 -
Phco4g03623 352 ProSiteProfiles Tify domain profile. 190 225 IPR010399 -
Phco4g03623 352 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 116 347 IPR040390 -
Phco4g03623 352 Pfam tify domain 191 224 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03623 Phco-Chr4 56059041 56062206 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phco4g03623 tify 1.7e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03623 4 56059041 56062206 Phco4g03623 4 56059041 56062206 ECH