Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02636 ATGGACGCAAGCAGGTCTGAGGGAAAGAGGGTCTTGAGGTACAACGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAGGAAGAGGTTGAGACGGGTTTTGGAGAAGATGGAAGGAGGAATAAGAGAGTAATGACAGATCTCTATGGAAAGAAAGGGTCCAAAGCTGGAGGCTCAATGCCACCTTCTTGTCAGGTAGATAATTGTGATGCTGATCTAAGTGAAGCTAAGCAGTATCACAGAAGGCACAAGGTTTGTGAGTACCATGCCAAGGTTCATTCCGTACTCATGGCAGGGCTGCAACAAAGGTTTTGCCAACAATGTAGCAGATTCCATGAGCTGTCTGAATTTGATGAATCAAAAAGGAGTTGTAGAACACGGTTGGTTGGCCACAATGAGAGGCGTCGCAAAAATGCAGTTGAATATCGTGGAGAATAA 444 0.4617 MDASRSEGKRVLRYNEEEEEEEEEEEEEEEEVETGFGEDGRRNKRVMTDLYGKKGSKAGGSMPPSCQVDNCDADLSEAKQYHRRHKVCEYHAKVHSVLMAGLQQRFCQQCSRFHELSEFDESKRSCRTRLVGHNERRRKNAVEYRGE 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02636 147 Pfam SBP domain 66 139 IPR004333 GO:0003677
Phco4g02636 147 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 45 141 IPR044817 GO:0003677
Phco4g02636 147 Coils Coil 9 35 - -
Phco4g02636 147 MobiDBLite consensus disorder prediction 1 16 - -
Phco4g02636 147 ProSiteProfiles Zinc finger SBP-type profile. 63 140 IPR004333 GO:0003677
Phco4g02636 147 MobiDBLite consensus disorder prediction 17 34 - -
Phco4g02636 147 Gene3D - 56 127 IPR036893 GO:0003677|GO:0005634
Phco4g02636 147 MobiDBLite consensus disorder prediction 1 44 - -
Phco4g02636 147 PIRSF SBP 2 147 IPR017238 GO:0003677|GO:0003700|GO:0009908
Phco4g02636 147 FunFam Squamosa promoter-binding-like protein 14 57 127 - -
Phco4g02636 147 SUPERFAMILY SBT domain 64 143 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02636 Phco-Chr4 47738084 47739184 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Phco4g02636 SBP 4.1e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02636 4 47738084 47739184 Phco11g00429 11 2866646 2868202 PCT