Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00567 ATGACCAAAAGGGGCATCTCACGCAGACTCATCACAATGGGTGTGTTTTTCTGCATGACCCTGTTGTTACCTAAGTTTTCTGAGTCTTCGAGCACGAGCGCGGTTCTGTACAGCGGGTGCACGCAGCAACGGTACACCCCAAACTCGCCGTACCAGTCGAACCTTGACTCGCTATTCACCTCGCTGGTGAACTCGGCGACCTACTCGTCTTATAACAACTTCACGATTGTGGGGTCCACGCAGCAGGACGCGGTGTTCGGCCTCTACCAGTGCCGCGGCGACCTCGCCATGCCGGACTGCGCCGCCTGCGTGGCGCGCGCTGTCACCCGCGCCGGCGATATCTGTCGCGGGACGTGCGGCGGCTCGGTGCAGCTCGACGGCTGCTTCGTGAAGTACGACAACGAGACGTTCCTCGGCGCACAGGACAAGACGGTTGTGCTGAAGAAGTGCGGGCCCTCCGTGGGGTACAACCCCGACGCCATGGGGAGCCGCGACGCGTTGCTTGCAGGGCTCACCGCCGCGGGAGGGAACTTCAGGGTGGGCGGCTCCGGCGAAGTGCGAGGCATGGCGCAGTGCAGCGGCGACCTGAGCTACGGCGAGTGCCAGGACTGCGTGGCGGAGGCCATCTCGCGGCTGAAGGGCGACTGCGGCACGGCGGATTACGGGGACATGTTCTTGGGGAAGTGTTATGCGCGGTACTCCACCGGTGGGGCCCACGCTAATTCCAAGGCCCACGGAGAATCAAATCATGGAGGTATAAAGACATTTGCTATAATTATTGGATCATTAGCAGGAGCAGCTATAGTTATTATTTTCCTTGCTTTCATGACCAAAATTTGTGGGAGACAGGGTAAGTAG 858 0.5967 MTKRGISRRLITMGVFFCMTLLLPKFSESSSTSAVLYSGCTQQRYTPNSPYQSNLDSLFTSLVNSATYSSYNNFTIVGSTQQDAVFGLYQCRGDLAMPDCAACVARAVTRAGDICRGTCGGSVQLDGCFVKYDNETFLGAQDKTVVLKKCGPSVGYNPDAMGSRDALLAGLTAAGGNFRVGGSGEVRGMAQCSGDLSYGECQDCVAEAISRLKGDCGTADYGDMFLGKCYARYSTGGAHANSKAHGESNHGGIKTFAIIIGSLAGAAIVIIFLAFMTKICGRQGK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00567 285 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Phco3g00567 285 FunFam Cysteine-rich repeat secretory protein 60 158 236 - -
Phco3g00567 285 Gene3D - 160 236 IPR038408 -
Phco3g00567 285 Gene3D - 31 137 IPR038408 -
Phco3g00567 285 ProSiteProfiles Gnk2-homologous domain profile. 138 238 IPR002902 -
Phco3g00567 285 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 13 280 - -
Phco3g00567 285 Pfam Salt stress response/antifungal 178 235 IPR002902 -
Phco3g00567 285 Pfam Salt stress response/antifungal 40 134 IPR002902 -
Phco3g00567 285 FunFam cysteine-rich repeat secretory protein 3 32 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00567 Phco-Chr3 4510229 4511769 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00567 3 4510229 4511769 Phco3g00567 3 4510229 4511769 ECH
Phco2g02630 2 56021745 56023007 Phco3g00567 3 4510229 4511769 PCT