Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00566 ATGGACCCTCTCTTTGTTATCCTATCCACTAATAAACACAATACAACACAACACAACTTGCATGTTCTCTTCCTCTCTCAACTTCTAACCTTTCTTTCTCTCTCCCTCTTTCCAATTCTTTCAAAAATGGTGTCTTTGGTTTCCCAAGACAACAACCTTGTTGCATTGGTTTCTCGTACAGGCAGAGAGTTACAACGCTACAGAAAAGGTCGTCGCCAAGTCGTGGGATGCATACCCTACAGATATAAAATTGTTGATCAAACTTCGTTAGAGGGACCAGAAGATTTAGAAGTTCTGGTTATCACTTCTCAGAAAGGCAAAGGGATGCTATTTCCTAAGGGAGGTTGGGAATTGGACGAATCCAAAAAGGAGGCAGCTTTGAGAGAAACCATAGAGGAAGCAGGGGTTCGAGGCACTGTTGAGGGGAAATTGGGTAAGTGGAGTTTCAAGAGCAAGACTCATGATACATTTTACGAGGGCTACATGTTCCCTCTACTTGTCCAAGAGCAATTGGAGTTCTGGCCAGAACAGAATTTTCGTCAAAGAATATGGATGAGCGTTTCTGATGCAAGGGAAGTTTGTCAACACTGGTGGATGAAAGAAGCTCTAGAGAGACTAGTAAACCGTCTCATGGCTCGGAAACTTGGTCCTCTCAGACAAATAGTAGGTTCTATACACTGCATAGGAGATGCCAATTCTGACTTGTAA 708 0.4294 MDPLFVILSTNKHNTTQHNLHVLFLSQLLTFLSLSLFPILSKMVSLVSQDNNLVALVSRTGRELQRYRKGRRQVVGCIPYRYKIVDQTSLEGPEDLEVLVITSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGTVEGKLGKWSFKSKTHDTFYEGYMFPLLVQEQLEFWPEQNFRQRIWMSVSDAREVCQHWWMKEALERLVNRLMARKLGPLRQIVGSIHCIGDANSDL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00566 235 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 56 210 - -
Phco3g00566 235 SUPERFAMILY Nudix 66 210 IPR015797 -
Phco3g00566 235 ProSitePatterns Nudix box signature. 114 135 IPR020084 GO:0016787
Phco3g00566 235 FunFam Nudix hydrolase 17, mitochondrial 57 209 - -
Phco3g00566 235 Pfam NUDIX domain 97 205 IPR000086 -
Phco3g00566 235 CDD Nudix_Hydrolase_9 73 200 IPR047198 GO:0016462
Phco3g00566 235 ProSiteProfiles Nudix hydrolase domain profile. 70 207 IPR000086 -
Phco3g00566 235 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 57 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00566 Phco-Chr3 4502698 4505110 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00566 3 4502698 4505110 Phco3g00566 3 4502698 4505110 ECH
Phco2g02629 2 56013866 56015143 Phco3g00566 3 4502698 4505110 PCT