Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00551 ATGAAACCAAACTTTGATCTTGAAGTTGAGGCATATGCAGAATATGAATCTGAAGTTAGCAGCCAGGTTGCTTCCAATGTTTCTATTTGTAGTGACAGCCTCACTAACATTTCCCACACCACAAATCCAATAGGGATTCATCCTAACTTAGATGCTATTTCACTTGACTTAACTCTCAACTTCAAGAACGGTGAGCCAGGGGGAAGAGATTCAATAGGATTCTCATTCTCAAGCACTAGCGAGAGCAGCAATGAACCTGCCTCTCAAACCACAGCAGCGACCATACCACGAGTCTTCTCTTGCAATTACTGTAAGCGTAAATTTTTCAGCTCTCAGGCTCTTGGTGGACACCAGAATGCCCACAAGAGAGAAAGAACATTAGCAAAAAGGGCTTTGAGAATGGGATTTTTCTCTGAAAGGTATGCCAATCTAGCATCTCTCCCTCTGCATGGTTCTTTTAGGTCCTTAGGAATAAAGGCACACTCTTCACTGCACCATGGTTTCTCAACAACAATGAGGCCTCCTGAGGTAAAAAGCAATGCAAGATTTGATCAAGGGTATGTTGGCATCCCAGTATTCTTGGAGGATGATGAGTCAGATTTGTTGTGGCCGGGTAGTTTTCGTCAGGTTGTCGAGGCAGGTGATAGTCATCAGAATTTCATACTGACTGGAAGTTCAGATTTGAGCTTTACTGGGGTAAATCCACCTGTAGACATAGAGAACTCAATACCAGATTTGACTTTGAAACTTTGA 753 0.4276 MKPNFDLEVEAYAEYESEVSSQVASNVSICSDSLTNISHTTNPIGIHPNLDAISLDLTLNFKNGEPGGRDSIGFSFSSTSESSNEPASQTTAATIPRVFSCNYCKRKFFSSQALGGHQNAHKRERTLAKRALRMGFFSERYANLASLPLHGSFRSLGIKAHSSLHHGFSTTMRPPEVKSNARFDQGYVGIPVFLEDDESDLLWPGSFRQVVEAGDSHQNFILTGSSDLSFTGVNPPVDIENSIPDLTLKL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00551 250 Gene3D Classic Zinc Finger 77 142 - -
Phco3g00551 250 ProSitePatterns Zinc finger C2H2 type domain signature. 101 121 IPR013087 -
Phco3g00551 250 ProSiteProfiles Zinc finger C2H2 type domain profile. 99 126 IPR013087 -
Phco3g00551 250 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 75 169 IPR044246 GO:0009788
Phco3g00551 250 SUPERFAMILY beta-beta-alpha zinc fingers 97 126 IPR036236 -
Phco3g00551 250 FunFam Zinc finger protein 2 76 145 - -
Phco3g00551 250 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00551 Phco-Chr3 4308017 4308769 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco3g00551 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00551 3 4308017 4308769 Phco3g00551 3 4308017 4308769 ECH
Phco2g02614 2 55887011 55887781 Phco3g00551 3 4308017 4308769 PCT