Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02614 ATGAAACAACACTTTGATCTTGAACTGGTGGCCTCAGCAGAATATGAATCTGAAGTTAACAGCCAGGTTGCTTCCAACATATCTATTCAAGAAACCTATGCAGGTCCTTGCAGTGACAACCTCACTAACTCTTCCCATGTCACAAAACCAATAGAACTTCATCTCCATTCAGATGCTATCTCCCTTGACTTAACTCTCAACTTCAACAACAATGAGTTGGTGGTTACAGATTCATCAGGACTCTCATTCTCAAGCACTGCTAGCGAGAGCAACAACGATCCTCCCTCTCAAACCATGCCACGGGTCTTCTCTTGCAATTACTGTAACCGCAAGTTTTTCAGCTCTCAGGCTCTTGGAGGCCACCAAAATGCGCACAAGAGAGAAAGAACATTAGCAAAGAGAGCCTTGCGCATGGGGTTTTTCTCTGAGAGGTATGCCAGTCTAGCATCTCTCCCTCTTCACGGTTCTTTCAGGTCCTTAGGCATAAAGGCACACTCTTCACTGCACCACGGCTTTTCACCAACAATGAGGCCTCCTGAGATGAAAAGCAGTGCAAGATTTGAGCAAGGATATATTGGTCTTCCAATATTCTTGGAGGAGGATGGGGCAGAACTCTTGTGGCAAGGTAGTTACCATCAGGTTCCCTCTAAGGGAGGCCATACTCATCAGAATTTCACACTCAGTGGAAGCTCTAATTTGAGTTTTATTGGGGTGAATCATCCACCGGCTGACATAGAGAACTCAACACCTGAGTTGACATTGAAACTTTGA 771 0.4514 MKQHFDLELVASAEYESEVNSQVASNISIQETYAGPCSDNLTNSSHVTKPIELHLHSDAISLDLTLNFNNNELVVTDSSGLSFSSTASESNNDPPSQTMPRVFSCNYCNRKFFSSQALGGHQNAHKRERTLAKRALRMGFFSERYASLASLPLHGSFRSLGIKAHSSLHHGFSPTMRPPEMKSSARFEQGYIGLPIFLEEDGAELLWQGSYHQVPSKGGHTHQNFTLSGSSNLSFIGVNHPPADIENSTPELTLKL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02614 256 ProSitePatterns Zinc finger C2H2 type domain signature. 105 125 IPR013087 -
Phco2g02614 256 ProSiteProfiles Zinc finger C2H2 type domain profile. 103 130 IPR013087 -
Phco2g02614 256 SUPERFAMILY beta-beta-alpha zinc fingers 101 130 IPR036236 -
Phco2g02614 256 Gene3D Classic Zinc Finger 82 146 - -
Phco2g02614 256 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 53 184 IPR044246 GO:0009788
Phco2g02614 256 FunFam Zinc finger protein 2 80 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02614 Phco-Chr2 55887011 55887781 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco2g02614 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02614 2 55887011 55887781 Phco2g02614 2 55887011 55887781 ECH
Phco2g02614 2 55887011 55887781 Phco3g00551 3 4308017 4308769 PCT