Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01113 ATGATGGCTACCCGTAACATTGAGAAGATGGCCTCCATTGATGCTCAGTTGAGGTTGCTGGCACCACGCAAGGTCTCTGATGATGACAAACTGGTTGAGTATGATGCTCTTTTGTTGGACCGTTTCCTTGACATTCTGCAGGATTTGCATGGTGAAGATATCAGACAAACGGTCCAAGATTGTTATGAGCTGTCAGCTGAGTACGAAGGGGAGCATCGACCTGAAAAGTTGGAGGAACTTGGGAATATGCTGACTGGTCTTGATGCTGGGGATTCAATTGTCATTGCCAAATCATTTTCTCACATGCTCAATTTGGCCAACTTGGCAGAAGAAGTTCAAATTGCGTACCGAAGAAGGATCAAGTTATTGAAGAAGGGTGATTTTGCGGATGAGAACTCTGCCATGACAGAGTCAGACATTGAAGAGACCTTGAAGAGGCTCGTGACTCAACTGAAGAAGACCCCCCAGGAAGTCTTCGATGCTCTGAAGAACCAAACTGTGGATTTGGTCCTAACTGCTCATCCTACTCAGTCTGTTCGCAGATCTTTGCTGCAAAAGCATGGAAGGATAAGGAATTGTTTGACACAATTATATGCCAAAGACATAACTCCAGATGACAAGCAGGAACTTGATGAGGCTTTACAAAGAGAGATTCAAGCTGCATTTCGCACAGATGAAATTCGACGGACTCCTCCTACACCACAAGATGAGATGAGGGCAGGGATGAGCTACTTTCATGAGACAATTTGGAAAGGTGTACCAAAGTTTCTGCGCCGGGTTGATACAGCTCTGAAGAACATTGGAATAAACGAACGTGTGCCATATAATGCTCCTGTTATTCAGTTCTCTTCTTGGATGGGAGGAGATCGTGATGGTAATCCAAGAGTAACCCCTGAAGTTACAAGGGATGTGTGTTTGCTGGCTAGAATGATGGCTGCTAATATGTACTTCTCTCAGATAGAGGATCTCATGTTTGAGTTGTCTATGTGGCGTTGCACTGACGAGCTCCGTGTTCGTGCTCATGAACTCCATAGGTCCTCAAAGAGAGATGCAAAACATTACATAGAGTTTTGGAAACAGATTCCTCCAAATGAGCCATATCGTGTTATTCTTGGTGATGTAAGAGACAAACTGTATAACACACGTGAACGTGCTCGCCAGTTATTAGCCAATGGGAGCTCTGATATCTCAGAGGAGACAACATTCACTAATATTGAGCAGTTCCTGGAGCCTCTTGAACTGTGCTATAGGTCACTCTGTGCATGTGGTGACAGACCAATAGCAGATGGAAGCCTCCTTGATTTCCTGCGGCAAGTTTCCACATTTGGACTCTCACTTGTGAGGCTTGACATCCGTCAAGAGTCAGAAAGGCACACTGATGTTATGGATGCTATCACAAAACACTTGGGAATTGGATCATACCGAGAGTGGTCTGAGGAAAAGAGGCAGCAGTGGCTCTTGTCTGAACTCAGTGGAAAACGCCCTCTCTTTGGCCATGACCTTCCCAAAACAGAAGAAATCAATGATGTTTTGGAAACCTTCCATGTCATTTCAGAGCTACCTAAAGACAACTTTGGTGCCTACATCATATCAATGGCCACAGCCCCATCTGATGTGCTGGCGGTTGAGCTTTTACAACGTGAGTGCCATGTGAAGGAGCCACTAAGGGTGGTGCCACTGTTTGAAAAGCTTGCTGATCTTGAGACTGCTCCAGCTTCCGTGGCACGACTTTTCTCCATAGATTGGTACAGAGAGCGCATCAATGGGAAGCAAGAAGTTATGATAGGGTACTCAGACTCAGGAAAAGATGCTGGCCGTCTTTCAGCTGCTTGGGCGCTTTACAAGGCTCAAGAGGAACTTGTGAAGGTTGCTAAGGACTTTGGCGTGAAGCTTACAATGTTTCATGGGAGAGGAGGGACTGTTGGAAGAGGAGGAGGACCAACTCATCTTGCTATTTTGTCTCAGCCACCAGACACCGTTCATGGCTCACTTCGGGTAACGGTTCAGGGTGAAGTCATTGAACAGTCTTTTGGAGAGGAGCACTTGTGCTTTAGGACACTTCAAAGGTTCACTGCAGCTACGCTTGAGCATGGCATGCATCCTCCTGTGTCACCAAAACCGGCATGGCGCGCCCTCATGGATGAGATGGCTGTCATTGCTACTCAGGAGTATCGCTCTGTTGTTTTCAGAGAGCCTCGTTTTGTTGAATATTTCAGACGTGCAACTCCTGAGTTGGAGTATGGAAGAATGAACATTGGCAGTCGTCCATCAAAGCGAAAACCAAGCGGAGGAATTGAATCGCTACGTGCTATTCCTTGGATTTTTGCATGGACACAAACAAGGTTTCATTTGCCAGTGTGGCTTGGTTTTGGGACAGCATTTAAGCATATTATTGAGAAAGATCCAAAGAATCTGCTAATGCTTCAGGATATGTACAACCAATGGCCTTTCTTTAGGGTCACCCTTGACTTGGTTGAGATGGTGTTTGCCAAGGGAGACCCCGGCATTGCAGCCCTATTTGATAAACTCCTTGTGCCAGAAGAGCTACGTCCATTTGGAGAGAGCTTACGAGCTAAATACGAAGAAACCAAAACCTTTCTTCTCCAGGTTGCTGGGCACAAGGATCTTCTTGAAGGAGACCCCTACTTGAAGCAAAGACTTCGACTTCGTGACTCATACATCACAACCCTGAATGTGTTGCAAGCCTACACGTTGAAGCGAATCCGTGATCCTGACTACCATGTGAAGTTGAGGCCACACTTGTCAAAGGACTACATGGAAACAAGCAAGCCAGCAGCAGAGCTTGTTAAACTTAACCCCAAAAGCGAGTATGCACCTGGCCTTGAAGACACCCTTATTTTGACAATGAAGGGTATTGCTGCTGGCATGCAAAATACCGGTTAA 2904 0.4604 MMATRNIEKMASIDAQLRLLAPRKVSDDDKLVEYDALLLDRFLDILQDLHGEDIRQTVQDCYELSAEYEGEHRPEKLEELGNMLTGLDAGDSIVIAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAMTESDIEETLKRLVTQLKKTPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANMYFSQIEDLMFELSMWRCTDELRVRAHELHRSSKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGSSDISEETTFTNIEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESERHTDVMDAITKHLGIGSYREWSEEKRQQWLLSELSGKRPLFGHDLPKTEEINDVLETFHVISELPKDNFGAYIISMATAPSDVLAVELLQRECHVKEPLRVVPLFEKLADLETAPASVARLFSIDWYRERINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELVKVAKDFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTVHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPAWRALMDEMAVIATQEYRSVVFREPRFVEYFRRATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGTAFKHIIEKDPKNLLMLQDMYNQWPFFRVTLDLVEMVFAKGDPGIAALFDKLLVPEELRPFGESLRAKYEETKTFLLQVAGHKDLLEGDPYLKQRLRLRDSYITTLNVLQAYTLKRIRDPDYHVKLRPHLSKDYMETSKPAAELVKLNPKSEYAPGLEDTLILTMKGIAAGMQNTG 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01113 967 Pfam Phosphoenolpyruvate carboxylase 37 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco10g01113 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 170 181 IPR018129 -
Phco10g01113 967 PRINTS Phosphoenolpyruvate carboxylase signature 222 238 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco10g01113 967 PRINTS Phosphoenolpyruvate carboxylase signature 765 791 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco10g01113 967 PRINTS Phosphoenolpyruvate carboxylase signature 633 662 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco10g01113 967 PRINTS Phosphoenolpyruvate carboxylase signature 442 462 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco10g01113 967 PRINTS Phosphoenolpyruvate carboxylase signature 591 611 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco10g01113 967 PRINTS Phosphoenolpyruvate carboxylase signature 169 182 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco10g01113 967 PRINTS Phosphoenolpyruvate carboxylase signature 282 297 IPR021135 GO:0006099|GO:0008964|GO:0015977
Phco10g01113 967 Hamap Phosphoenolpyruvate carboxylase [ppc]. 24 967 IPR022805 GO:0006099|GO:0008964|GO:0015977
Phco10g01113 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 593 605 IPR033129 -
Phco10g01113 967 Gene3D Phosphoenolpyruvate/pyruvate domain 310 445 - -
Phco10g01113 967 FunFam Phosphoenolpyruvate carboxylase 1 310 445 - -
Phco10g01113 967 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 34 967 IPR015813 GO:0003824
Phco10g01113 967 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 5 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01113 Phco-Chr10 32893720 32899003 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01113 10 32893720 32899003 Phco10g01113 10 32893720 32899003 ECH
Phco10g01113 10 32893720 32899003 Phco9g01496 9 35076092 35082136 PCT
Phco9g01792 9 41956694 41963685 Phco10g01113 10 32893720 32899003 PCT