Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01006 ATGATGTTATCAGCTTCGATGTCTGCTCTAACGAGGAGTTCGCTGGAGGAGATGCTTGAGTCACTTCGCAAGAGAGACGAGGAGGAGAGGCCGAAGGACTTGCCGCCGGCATTGCCGTCACGGCCGCAGTCGAGGGCGCGGATGCCGCCGGCGAGGAGGTCGTTGCCTAATAACTTCAAGGTTAATGGCGAAAATGATGCGATGGGGCACAGAAGGAAGGGTAGTTTTGGGTCCAAGAAGGTCAAGTTGCATGTGGAATCCCCTTATGAAGTCATAACAGAAGAGAAAGTGGGTGAACAACCATCACCGTCTCCGGTTCCAACTGCAAATGATTCTTCTACTGATTGTGAAGCTCCTCCTCAGTCTGAAGAGTTGGTGGATGATAACGTTGCTTATTTCATAAAAAAGAAACTTCATGTTTGGTGTAAGCAACCAAAGGGGAAGTGGGAGCTGGGAATGATACAGTCAACTTCGGGAGAGGAAGCATCTGTTTCTCTCTCAAATGGAAATGTTATGCAAGTGGCCAGGTCAGACCTCCTACCAGCTAATCCTGATATTTTAGAGGGTATTGAAGATCTTATACAGCTCAGTTATTTAAATGAGCCTTCAGTTCTTCACAATCTTCAGTATAGATATACTCAGGATATGATTTATAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCTTTCAAAAATGTCGAAGTTTATGGAATTGATTATGTCTCAGCTTATAGGCAGAAACTTACGGATAGTCCTCATGTTTATGCTTTGGCAGATGCAGCTTATAATGAGATGATGAGAGATGAAGCAAATCAGTCTATTATCATAAGTGGTGAAAGTGGAGCTGGGAAAACAGAGACCGCCAAAGTTGCTATGCAATACTTAGCTGCTATTGGTGGTGGCTGTTCAGGAATAGAAAATGAAATCCTTCAGACAAATTATATTCTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGATAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGTGCAATGGGGAAAATTTGTGGGGCAAAAGTTCAAACATTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTTGCCTCGGGCGAGAGGTCATATCACATATTTTATCAACTTTGTGCAGGATCTTCATCCGATCTAAAAGAAAGACTGAATCTTAGGTCGGCTAGCGAATATAAATATCTTAACCAAAGTGACTTCACAACAATTGATGGTGTTGATGATTCTAAAAAGTTTAATAATTTGATGAAAGCATTGGATGTTATTCGAATGTGCAAAGAGGATCAAGAGCTAGCTTTTAGGATGCTGGCTGCTATACTATGGTTGGGAAATATATCATTCCAGGACACTGATAATGAAAATCACATTGAGGTGGTGAATGATGAAGCTGTAACAAATGCTGCTGTGCTCATGGGTTGCAGACCCCAGGAGCTAATGGCAGCGTTATCTACCCATAAAATCCAAGCTGGCAAGGATACTATTACCAAGACATTGACCATGCGGCAGGCAATTGATGCAAGAGATGCAATAGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAATAAGTCACTTCAAGTGGGTAAACGATGTACTGGGAGATCCATAAGTATCCTTGATATTTATGGATTTGAGTCATTCCAGAATAACAGCTTTGAACAATTTTGTATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAATTAGATGGCATTGATTGGACCAAAGTAGATTTTGAGGACAACCAAGTGTGTTTGGATCTCTTTGAAAAGAAGCCTCTTGGGCTGTTCTCTTTGTTGGACGAGGAATCAAATTTCCCCAGGGCCACTGATCTAACACTAGCCAACAAACTTAAGCAGCACCTGCACGCTAATCCTTGCTTTAAAGGGGAAAGAGGCAGGGCTTTTGGTGTCTGTCATTATGCCGGGGAGGTTTTCTATGATACAAGTGGCTTCCTAGAAAAGAATAGAGATCCACTACCATCTGATTCCATTCAACTACTGTCATCATGTAGTTGTGAACTGCTTCAGTTGTTCTCCAAGATGCTTAATCAGCCTCAGAAGCAATTGAATTCCTTGCATGGAGGTGCTCTGGACTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTATTCAAGTTGATGCATCAGCTGGAGAACACCACACCTCACTTTATTCGATGTATAAAGCCAAATACTAAGCAACTTCCTGGAATATATGATCAAGATCTTGTACTACAACAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCGAGGGCTGGATATCCTACTCGAATGACACATCAAGAATTTTCTAGAAGGTATGGGTTTCTGCTTTTTGAGGCAAACACATCTCAGGACCCATTGAGCATTTCAGTTGCGGTTTTGCAACAGTTTAATATCCCTCCTGAAATGTACCAAGTTGGCTTCACCAAACTGTACATTCGAACTGGGCAGATTGGGGCACTGGAAGAAAGGAGAAAATATCTTTTGGAGGGACTACTTGTTATTCAAAAAAGCTTTCGTGGTTATCAAGCTCGCTGTCATTACCATGAGATTAAGAAGGGAGTGACTACTTTACAATCATTTGTTCGTGGGGAAATTGGAAGAAGGGCATATGGTGTTTTGGTGAAGTCTTCTATGACTATTTCTTCTGAAAATATTAAGGAGATGCTGGCAGCCACAACACTACAATCTGTAATTCGTGGATGGCTGGTTCGGAGGAATTCTGGTGACTTAAATAACTCTAAGAAAAGTCCTGAAAATGCAAGATCTAGGCGAAGGTCACGTGTGAATATGCCCAGAGAAAAGCAGGATGTGCCAAGTGAGCGGGTCCAGAATCTACCTTCAGCTTTAGCTGAACTCCAAAGGCGGGTTGTGAAGGCTGAAGTTACCATAGAGCAAAAGGAAGGGGAAAATGCTGAATTGAAGGATCAGCTAAAACAGTTTGAGAGTAGATGGATGGAGTACGAGAAAAGGATGAAATCAATGGAGGAGATGTGGCAAAGACAAATGTCATCTTTGCAAATGAGCCTTGCTGCTGCTAGAAAGAGCCTTGCTTCTGAGAATGCCAACAATCAACATGCAAGACGTGATGTTTCATCACCTTTCGCCTATGATTCGGAAGATGCTTCCATGGGATCTCGAACACCTAGTGCAAGCACTCCTTTGAAGTATTCTACTAGTATTTCTGAAGCTGGACTAGGGAGAGATGGTGCTTTGGCTTCAGTGAGCCACCTGATGAAGGAATTTGATCAACGCAGACAGACCTTCGATTATGATGCCAGAAATCTGGTTGATGTTAGAACAGGTCAATCTGCTAACATGAATTCCATTGAAGAACTTCGGAAACTCAAACATAGGTTTGAGGGGTGGAAGAAAGAATACAAGGTTAGATTAAAAGAAACAAAAGCAAGACTTAATAAATTAGGGAATTCAGAAATGGATAAAAGGCGGAGATGGTGGGGGAAGCTGAGTTCTAGAGCACTATAG 3582 0.4176 MMLSASMSALTRSSLEEMLESLRKRDEEERPKDLPPALPSRPQSRARMPPARRSLPNNFKVNGENDAMGHRRKGSFGSKKVKLHVESPYEVITEEKVGEQPSPSPVPTANDSSTDCEAPPQSEELVDDNVAYFIKKKLHVWCKQPKGKWELGMIQSTSGEEASVSLSNGNVMQVARSDLLPANPDILEGIEDLIQLSYLNEPSVLHNLQYRYTQDMIYSKAGPILIALNPFKNVEVYGIDYVSAYRQKLTDSPHVYALADAAYNEMMRDEANQSIIISGESGAGKTETAKVAMQYLAAIGGGCSGIENEILQTNYILEAFGNAKTSRNDNSSRFGKLIEIHFSAMGKICGAKVQTFLLEKSRVVQLASGERSYHIFYQLCAGSSSDLKERLNLRSASEYKYLNQSDFTTIDGVDDSKKFNNLMKALDVIRMCKEDQELAFRMLAAILWLGNISFQDTDNENHIEVVNDEAVTNAAVLMGCRPQELMAALSTHKIQAGKDTITKTLTMRQAIDARDAIAKFIYASLFDWLVEQVNKSLQVGKRCTGRSISILDIYGFESFQNNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGIDWTKVDFEDNQVCLDLFEKKPLGLFSLLDEESNFPRATDLTLANKLKQHLHANPCFKGERGRAFGVCHYAGEVFYDTSGFLEKNRDPLPSDSIQLLSSCSCELLQLFSKMLNQPQKQLNSLHGGALDSQKQSVGTKFKGQLFKLMHQLENTTPHFIRCIKPNTKQLPGIYDQDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFSRRYGFLLFEANTSQDPLSISVAVLQQFNIPPEMYQVGFTKLYIRTGQIGALEERRKYLLEGLLVIQKSFRGYQARCHYHEIKKGVTTLQSFVRGEIGRRAYGVLVKSSMTISSENIKEMLAATTLQSVIRGWLVRRNSGDLNNSKKSPENARSRRRSRVNMPREKQDVPSERVQNLPSALAELQRRVVKAEVTIEQKEGENAELKDQLKQFESRWMEYEKRMKSMEEMWQRQMSSLQMSLAAARKSLASENANNQHARRDVSSPFAYDSEDASMGSRTPSASTPLKYSTSISEAGLGRDGALASVSHLMKEFDQRRQTFDYDARNLVDVRTGQSANMNSIEELRKLKHRFEGWKKEYKVRLKETKARLNKLGNSEMDKRRRWWGKLSSRAL 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01006 1193 MobiDBLite consensus disorder prediction 949 972 - -
Phco10g01006 1193 FunFam Unconventional myosin-XIX 559 748 - -
Phco10g01006 1193 MobiDBLite consensus disorder prediction 1 15 - -
Phco10g01006 1193 SMART iq_5 859 881 IPR000048 GO:0005515
Phco10g01006 1193 SMART iq_5 919 941 IPR000048 GO:0005515
Phco10g01006 1193 SMART iq_5 882 904 IPR000048 GO:0005515
Phco10g01006 1193 Pfam Myosin head (motor domain) 191 846 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco10g01006 1193 FunFam Myosin IE heavy chain 428 536 - -
Phco10g01006 1193 MobiDBLite consensus disorder prediction 1049 1088 - -
Phco10g01006 1193 MobiDBLite consensus disorder prediction 17 35 - -
Phco10g01006 1193 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 135 184 IPR004009 GO:0003774|GO:0005524|GO:0016459
Phco10g01006 1193 SMART MYSc_2a 182 859 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco10g01006 1193 MobiDBLite consensus disorder prediction 103 119 - -
Phco10g01006 1193 Pfam IQ calmodulin-binding motif 866 881 IPR000048 GO:0005515
Phco10g01006 1193 Pfam IQ calmodulin-binding motif 923 939 IPR000048 GO:0005515
Phco10g01006 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 907 IPR027417 -
Phco10g01006 1193 MobiDBLite consensus disorder prediction 93 122 - -
Phco10g01006 1193 Gene3D Myosin VI head, motor domain, U50 subdomain 428 536 - -
Phco10g01006 1193 PANTHER MYOSIN 181 1180 - -
Phco10g01006 1193 ProSiteProfiles IQ motif profile. 883 912 IPR000048 GO:0005515
Phco10g01006 1193 ProSiteProfiles Myosin motor domain profile. 188 858 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco10g01006 1193 Coils Coil 1156 1176 - -
Phco10g01006 1193 Coils Coil 1042 1062 - -
Phco10g01006 1193 Gene3D - 371 427 - -
Phco10g01006 1193 ProSiteProfiles IQ motif profile. 860 889 IPR000048 GO:0005515
Phco10g01006 1193 Gene3D - 864 910 - -
Phco10g01006 1193 MobiDBLite consensus disorder prediction 65 80 - -
Phco10g01006 1193 Gene3D - 792 859 - -
Phco10g01006 1193 PRINTS Myosin heavy chain signature 547 575 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco10g01006 1193 PRINTS Myosin heavy chain signature 218 237 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco10g01006 1193 PRINTS Myosin heavy chain signature 600 628 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco10g01006 1193 PRINTS Myosin heavy chain signature 272 297 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco10g01006 1193 PRINTS Myosin heavy chain signature 315 342 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phco10g01006 1193 FunFam Myosin heavy chain 371 427 - -
Phco10g01006 1193 CDD MYSc_Myo8 202 846 IPR036022 -
Phco10g01006 1193 MobiDBLite consensus disorder prediction 1 80 - -
Phco10g01006 1193 Coils Coil 982 1030 - -
Phco10g01006 1193 Gene3D - 559 748 - -
Phco10g01006 1193 ProSiteProfiles IQ motif profile. 920 949 IPR000048 GO:0005515
Phco10g01006 1193 MobiDBLite consensus disorder prediction 941 976 - -
Phco10g01006 1193 Gene3D Kinesin motor domain 187 791 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01006 Phco-Chr10 30267983 30277291 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01006 10 30267983 30277291 Phco9g01744 9 41232911 41248152 PCT