Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04136 ATGGGTGCCAACTGCAGACACGTTTTTCACAGATTACAGAGTTTGAGTTTTGCCACTTATTGGAAAAAAAGCACCACGCCAACCGGCAGACGGATTTTCCACAGGGATGTGGAAAAGGAAGAATTCCAGTATGCCAGCACTCAATGTCTGTCATCCTACTACAGTGTCTTTGTGGTTCGTCTAGCAATCATGGCCATGCTAGCCATCTTGATTGGTCTGCTCACTTTTCTCACATGGCATTTCACAAAGATTTATACAACAAAATCTCTTAATAGCTTGGCATATGACCTGCGTTATGAACTTCTGCAACGCCCCATCTTGAGGATGTGGAACATTTTGAATTCTACTGCTGAAATTACTACTGCTCAGGTTAAGCTGTCTCAGTATGTGATCAGAAGCCACACCACCAACCTTGCCACTCAAGCAGACCAAGTTGAGATGTATGATGCGATGAGAGCTGTGACGTGGGCACTGTTTGCCAGTAAAAAAGCTCTCAATTCAATAACTGTCAAATACAAGAATGGATTTGTCCAAGCATTCCATAGAGACCTGAAGGAAAACAACACCTTTTACATTTATTCTGATATTGCAAATTACTCCATGGCTGCCACTGCCCACAATGAGATCAATATTCATGGAAACAAGTCTGCAATTTGGTATCGGGAACCTCTTGATCCAGTCAGTGGAGAGAAGATTGGAAAAGTAATGCCAATTGCACCAGAAGACTCGATCAATATAGCAGGCCTCTCCCAAGTACCTGATGGTGTAGCTTCATGGCATGTCTCTGTTAGCAAGTTTACAGATTCACCATTGCTTTCTGCGGCATTGCCAGTGTGGGACTCCTCAAATAAAAGCATTGTGGCAGTTGTGGGTGTCACAACTGCACTTTATAGTGTGGGGCAGCTCATGAAAGAGCTAGTTGAGTTGCACAGTGGTCATATGTATTTGACCTCTCAAGAGGGTTACTTACTTGCAACTTCCACAAATGCACCTCTACTGTCAAATTCTACAAAGCCTCCTAAGCTTAAGATGGCTGTTGACTGTGAAAATGAAGTAATAAGAGAGGGAGCTCAGTGGCTACAGAAAACCTATGGCAACAATTTCCCTCAAAGTCATGAACTTCATGTAGAGAATGTCAAGCTAGGTCCCCAGCAATATTACATCGACTCATTCTTCCTGAACTTGAAGAGACTTCCTCTGGTGGGTGTAATCATCATACCTAGAAAGCATATCATGGGGCAAGCAGATGAAAGAGCCTTCAAAACATTGGTTATTCTTATATCTGCATCATTGTGCATTATTGTCATTGGATGTGTTTGCATTTTGATACTGACAAATGGAGTGTCAAAGGAAATGAAACTAAGAGCAGAACTGATCAGCCACCTGGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGTCAATTTCTTGCAAATATGAGTCATGAATTAAGGACACCAATGGCAGCAGTAATCGGGTTACTCGACATTCTTATATCTGATGACCGTCTCACAAATGAGCAATGTGCAACAGTTACTCAAATAAGAAAATGCTCAACTGCTCTGCTTCGTCTACTTAATAACATCCTGGACCTAAGCAAGGTGGAATCTGGAAAACTGGTCCTAGAAGATGCAGAATTTGATTTGGGGCGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTGCAGTGCATTAACCACAATGTAGAGACTGTTCTAGACTTGTCTGATGATATGCCAAAGCTAGTTCGAGGTGATTCTGCTAGGGTAGTTCAAATTTTTGCAAATTTGATCAACAACTCCATTAAGTTTACTCTATCCGGTCACATTATTCTGAGAGGATGGTGTGAAAACCCAAATGCTTGCAGTGATGATACAAATTTTCCACTAGAGCAAAAGAAATCACGGTGTTCACAGAAGAGCAGAGCAAAACAACATGAAAACCATGCAAAGAGGACTTCCAACAGAGATAACAAAATAGTACTTTGGTTTGAAGTTGATGATACAGGCTGTGGTATTGATCCAAGTAAATGGGAATCCGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTAGACTGCATGGAGGCACGGGTCTTGGTCTTTGCATCGTCAGAACCTTGGTTAACAAGATGGGTGGAGAAATCAAGGTTGTCAAAAAGGAGGGCCAAGGAACACTGATGCGGTTATACTTGCGTCTGAGTGCACCTCTGGATGCCACAGAACAACATTGTCAAGTAGATTTTGCTAACAAAGGCTTAGTGGTACTTTTTGCACTCCATGGCAGTATGGGTCGATCTGTTACATCTAAGTGGTTACAGAAAAATGGGGTAATATCTATGGAGGCATCAGAATGGAATGGATTAACACAAATTCTTAGGGTACTCTTTCATGCTAGAAGTTCAGCTCATAATAATGGTTTTGATGCAAATTATTCAGTGCATGAAAATTTAAAGTCGAAACTACTGAGCATACAGGAATTGAGGAACCCAGTTTTTGTCATTGCTGTTGACATTGGTCTACTTGATTTGAGCACAGATATATGGAAGGAACAGCTTAATTTCCTTCACAAATACTTTGGGAGAGCAAAATTCGTTTGGATACTAAATCATGACTCCTCCAATACCATAAAGTCGGAGCTTTGCAGGAAAGGACATACACTCACAGTGAACAAACCCCTCTACAAAACAAAAATGCTTCATATTTTGGAAACCATTATAAAGGAAAGAAGTGATGAGCTACAAAAGAAAATTATGACTACTCCAAGAGCTACAGTGAAAGAGGGTTATTTGCATGAGAGTCTTGAGATTGATTATACTCAATGTGATGTTGCAAGCTCAGATGGTTCTGACATATCTGACACGGGAGGTTCTAATCCTGTTTGTGAGAGTGGAGATAAACAAAGAGAGAAGGTAGTGAGATCTGAATCATCATCACAACACCAGATAAATAACTTGGTTGGATTAGCAAATGGATATATGGAAGATAATAATCCTTGGAAGGAAGAGTTATGTCAGAGCAGCCTCAACTCTAACGATGTCACTGCGAATGACACACCAAAATCATCCTCCACCAAACAAGCATTGTGTGCAAAAGGTACTCAAGATGAAGATTCTGAATATGGTGAAACACGAAGGGCCAGTAGCTCAAGCAGAACAGTGAGTGGAAAGAAATCTCTTGAAGGTCTGAGGATATTGCTTGCAGAAGATACACCAGTAATTCAAAGGGTTGCAACCATAATGCTTGAAAAGATGGGAGCCATTGTTGTAGCCGTAGGGGATGGACAACAAGCAGTGGATGCTCTGAATAGCACGCCTGGTCTTGAAGATTGTAGAAGGGAGTCTAAGGAAAGAAACACAAGATCATCTCAAACTGAGATTCTCAGTTTCCCTCCATATGACTTGATCCTAATGGATTGTCAGGTATGA 3438 0.4124 MGANCRHVFHRLQSLSFATYWKKSTTPTGRRIFHRDVEKEEFQYASTQCLSSYYSVFVVRLAIMAMLAILIGLLTFLTWHFTKIYTTKSLNSLAYDLRYELLQRPILRMWNILNSTAEITTAQVKLSQYVIRSHTTNLATQADQVEMYDAMRAVTWALFASKKALNSITVKYKNGFVQAFHRDLKENNTFYIYSDIANYSMAATAHNEINIHGNKSAIWYREPLDPVSGEKIGKVMPIAPEDSINIAGLSQVPDGVASWHVSVSKFTDSPLLSAALPVWDSSNKSIVAVVGVTTALYSVGQLMKELVELHSGHMYLTSQEGYLLATSTNAPLLSNSTKPPKLKMAVDCENEVIREGAQWLQKTYGNNFPQSHELHVENVKLGPQQYYIDSFFLNLKRLPLVGVIIIPRKHIMGQADERAFKTLVILISASLCIIVIGCVCILILTNGVSKEMKLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDRLTNEQCATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSARVVQIFANLINNSIKFTLSGHIILRGWCENPNACSDDTNFPLEQKKSRCSQKSRAKQHENHAKRTSNRDNKIVLWFEVDDTGCGIDPSKWESVFESFEQADPSTTRLHGGTGLGLCIVRTLVNKMGGEIKVVKKEGQGTLMRLYLRLSAPLDATEQHCQVDFANKGLVVLFALHGSMGRSVTSKWLQKNGVISMEASEWNGLTQILRVLFHARSSAHNNGFDANYSVHENLKSKLLSIQELRNPVFVIAVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWILNHDSSNTIKSELCRKGHTLTVNKPLYKTKMLHILETIIKERSDELQKKIMTTPRATVKEGYLHESLEIDYTQCDVASSDGSDISDTGGSNPVCESGDKQREKVVRSESSSQHQINNLVGLANGYMEDNNPWKEELCQSSLNSNDVTANDTPKSSSTKQALCAKGTQDEDSEYGETRRASSSSRTVSGKKSLEGLRILLAEDTPVIQRVATIMLEKMGAIVVAVGDGQQAVDALNSTPGLEDCRRESKERNTRSSQTEILSFPPYDLILMDCQV* 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04136 1145 MobiDBLite consensus disorder prediction 1014 1035 - -
Phac3g04136 1145 PRINTS Bacterial sensor protein C-terminal signature 699 717 IPR004358 GO:0016310|GO:0016772
Phac3g04136 1145 PRINTS Bacterial sensor protein C-terminal signature 723 736 IPR004358 GO:0016310|GO:0016772
Phac3g04136 1145 PRINTS Bacterial sensor protein C-terminal signature 664 678 IPR004358 GO:0016310|GO:0016772
Phac3g04136 1145 PRINTS Bacterial sensor protein C-terminal signature 682 692 IPR004358 GO:0016310|GO:0016772
Phac3g04136 1145 SMART HisKA_10 474 540 IPR003661 GO:0000155|GO:0007165
Phac3g04136 1145 ProSiteProfiles Histidine kinase domain profile. 481 739 IPR005467 -
Phac3g04136 1145 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 529 736 IPR036890 -
Phac3g04136 1145 SUPERFAMILY CheY-like 1064 1144 IPR011006 -
Phac3g04136 1145 MobiDBLite consensus disorder prediction 1014 1058 - -
Phac3g04136 1145 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 587 737 IPR003594 -
Phac3g04136 1145 CDD HisKA 475 536 IPR003661 GO:0000155|GO:0007165
Phac3g04136 1145 SMART HKATPase_4 587 739 IPR003594 -
Phac3g04136 1145 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 461 541 IPR036097 GO:0000155|GO:0007165
Phac3g04136 1145 Gene3D - 462 541 - -
Phac3g04136 1145 MobiDBLite consensus disorder prediction 951 984 - -
Phac3g04136 1145 FunFam Histidine kinase 1-like protein 462 541 - -
Phac3g04136 1145 CDD REC_hyHK_CKI1_RcsC-like 1068 1144 - -
Phac3g04136 1145 PANTHER TWO-COMPONENT HISTIDINE KINASE 42 743 - -
Phac3g04136 1145 ProSiteProfiles Response regulatory domain profile. 1067 1145 IPR001789 GO:0000160
Phac3g04136 1145 Gene3D - 1057 1145 - -
Phac3g04136 1145 MobiDBLite consensus disorder prediction 951 965 - -
Phac3g04136 1145 MobiDBLite consensus disorder prediction 635 655 - -
Phac3g04136 1145 Pfam His Kinase A (phospho-acceptor) domain 475 540 IPR003661 GO:0000155|GO:0007165
Phac3g04136 1145 Gene3D - 542 740 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04136 Phac-Chr3 40567906 40577954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04136 6 1145 Histidine Kinase Gene Family AT2G17820 62.652 0.0 1422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04136 3 40567906 40577954 Phac3g04136 3 40567906 40577954 ECH
Phac2g01711 2 18840089 18847715 Phac3g04136 3 40567906 40577954 PCT