Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04807 ATGGCCGACATGAAAGACAAGGTTAAAGGGTTCATGAAGAAAGTGAACAACCCTTTCTCCTCTTCTTCATCTGGAAAATTCAAGGGCCAAGGTAGAGTCCTCGGTTCTTCTTCTACACCCGCCAATTCCAATCCTACCCCTCGCCCCATTCCTTCGCTCAACCCTAATTCCAAACCCTCTTCATCCAATTCCAATCCCAAACCCACTTCAACCACTCCCAAACCCTCGCCCCACGATGCGGAGCCCAGTAGAAGCACCGAGAAGCCTCGCAAAGATGGTGATGGGTTTGACCCGTTTGATTCTTTGGTCACTAATTCCAACAGATCGCAGAACGGGTATTCACTGAACGTGTATGAATGTCCCGTTTGTAAACAACCCTTCGGATCCGAAGAAGCTGTGTCTGAACACGTGGATGGTTGTTTGAGCACCCTTGTTGAGCGTGAGCCTATTGGTGATGATGGAAACGGGGTTTCAGAGAGTGGGGGTGGGTCTAACACTAATGGTGAATTGGAGGTTTGTGTTGGGACATACATTTCAGGGAATCCATCTGAGGGATCGGTTGATATTGTTCTCAAACTTTTGAGGAATATTGGTAGGGAGCCTGAGAATGTGAAGTTTAGGAGGATCAGGATGAATAATCCCAAGATAAAAGAGGCTGTTGGTGATATTGCTGGGGGAGTTGAGTTGCTCAGTTTTCTGGGGTTTGAACTCAGGGAGGAGAATGGAGAGACATGGGCAGTGATGGAGGTTCCCAGAGAGGAGCAGATAAAATTCATCAAGGAGGCAATTGCGTTACTGGAATCACAACTTGTGCAACAACAAGGACCTCCAAAGAGAGAGGAGGATTCGGCATCTGCAAATTCTGCGCAGAGGGGTGCGAAAGCCGAGCCAAAGCAAGTCGACAGACAGGTGAAGGTCTTCTTTGCTGTCCCTGAAAGTGTCGCAGCTAAAATTGAGCTACCAGATTCCTTCTATAAGCTTTCAGCGGAAGAGGTGAGAAGAGAAGCTGATTTAAGGAGAAAAAAGATTGCTGATTCTCAGCTTTTGATCCCCAAGTCACTTAAAGAAAAACAAGCAAAAGCCTCCAGGAAGAGATACACAAAAACTATTATCAGGATTCAATTTCCCGATGGAGTTGTACTTCAAGCCGTATTTGCTCCATGGGAACCAACCACTGCTCTCTATGAGTTTGTCAGCTCGGCACTAAAAGAACCAGGTTTGGAATTTGACCTAATGCATCCTGTAGTTGTCCAACGGCGTGTGATCCCTCGTTTTCCAAAAGCAGGGGAAAATGCTAAAACAATAGAGGATGAAGACCTGGTACCTTCAGCTTTAATTAAGTTCAAGCCCTTGGAAACAGATTCTGTTGTTTTCACCGGTCTCAAAAATGAATTGCTTGAAATCAGTGAACCACTTGTTAATGGTTAA 1428 0.458 MADMKDKVKGFMKKVNNPFSSSSSGKFKGQGRVLGSSSTPANSNPTPRPIPSLNPNSKPSSSNSNPKPTSTTPKPSPHDAEPSRSTEKPRKDGDGFDPFDSLVTNSNRSQNGYSLNVYECPVCKQPFGSEEAVSEHVDGCLSTLVEREPIGDDGNGVSESGGGSNTNGELEVCVGTYISGNPSEGSVDIVLKLLRNIGREPENVKFRRIRMNNPKIKEAVGDIAGGVELLSFLGFELREENGETWAVMEVPREEQIKFIKEAIALLESQLVQQQGPPKREEDSASANSAQRGAKAEPKQVDRQVKVFFAVPESVAAKIELPDSFYKLSAEEVRREADLRRKKIADSQLLIPKSLKEKQAKASRKRYTKTIIRIQFPDGVVLQAVFAPWEPTTALYEFVSSALKEPGLEFDLMHPVVVQRRVIPRFPKAGENAKTIEDEDLVPSALIKFKPLETDSVVFTGLKNELLEISEPLVNG* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04807 475 SUPERFAMILY PUG domain-like 182 268 IPR036339 -
Phac2g04807 475 Pfam UBX domain 365 444 IPR001012 GO:0005515
Phac2g04807 475 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 474 - -
Phac2g04807 475 MobiDBLite consensus disorder prediction 1 110 - -
Phac2g04807 475 ProSiteProfiles UBX domain profile. 364 448 IPR001012 GO:0005515
Phac2g04807 475 Pfam PUB domain 184 258 IPR018997 -
Phac2g04807 475 SUPERFAMILY Ubiquitin-like 340 448 IPR029071 -
Phac2g04807 475 SMART PGNneu 185 252 - -
Phac2g04807 475 MobiDBLite consensus disorder prediction 80 97 - -
Phac2g04807 475 MobiDBLite consensus disorder prediction 55 69 - -
Phac2g04807 475 CDD PUB 183 263 - -
Phac2g04807 475 MobiDBLite consensus disorder prediction 271 292 - -
Phac2g04807 475 MobiDBLite consensus disorder prediction 15 43 - -
Phac2g04807 475 MobiDBLite consensus disorder prediction 271 297 - -
Phac2g04807 475 Gene3D - 358 451 - -
Phac2g04807 475 Gene3D - 179 268 - -
Phac2g04807 475 FunFam UBX domain-containing protein 6 358 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04807 Phac-Chr2 44716340 44720432 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04807 1 396 C2H2 Transcription Factor Family AT2G01650 54.988 7.48e-144 415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04807 2 44716340 44720432 Phac2g04807 2 44716340 44720432 ECH