Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02192 ATGGAGAATGCAGCACAACAGAGAAACATAGATACTCTATACAATTTGATTGAGCAGAATCCACGTGTTTTAGAAGAGATAGATTTGATACCATTTGTTGAAACTCCTTTGCATGTTGCTGCACGTGCTGGACATCTTCAATTTGCCAATGAGATCATGATGTTAAAACCTTCATTTTCATGGAAATTTAATCCCCAAGGACTAAGACCCATTCACCTTGCTTTAGAACATGGTCACGCCACAATGGTCCTTCACCTTATAGAGATGGACAACAAACTCGTTCGAGCCAAAATGAGAGGAGGTCTCACTCTTTTGCATTTGGCAAGTCAATCCGGAGATTTAAACCTTTTAAGTGTTGTTCTCGAAGCTTGTCCAGATTCAATAAATGATTTGACTGCTACAAATGAGACTGCACTGCATTTTGCTGTTAAATACGAGAAGTTTAAGGCTTTTGAGTTCTTACTTAGGTGGCTCAGGACAAATACAGTTGAGTTGGAAGACATTCTGAACCAGAAAGACGTGGAGGGCAACACCACTTTACACATTGCAGCGATAAAGAATGACACGAAGGCAATGAAATTGTTGATAGAGATTATGAGGGATCTACATGCTTCAAATTTGATGGGTCAAAGGGCATTTGATATAATAAACAACCAAGAAATTAGAAAGAATTTGGTGAGGAGTGAAAAAAGAGTTAGAATGTTTAGAACAGGCTTTTTATTAATCGAAACAATACATGAGTGGCTAATTCGAAAAACTGGGATGAAAGAAAAATTGTCAAATGAAATACGGAACATGTACATCGTAGTGGCTAGTCTTATTGCAACCACAACCTATCAAGCAGTACTGAGTCCACCTGGTGGATTTCGTCAGGTTGATGAAGGTGGGACTAATACTACTCTCTTTCTAGCTCAAGGGACATCAGTGATGCCAGATGAAGTATTTATGGTGTTTTCGGCCACAAATTTATTTGCCTTTATGACATCCATTCTCACAATTGTTTTGCTGATGCCTAAGAATGTCGGATGGTATCTACTGTATCCGTCAACAATGTTCCTTGCAATCGGCTACATCATGTCTATAATGGTCATATCTCCAAATGATTTCACTAAAGACCTCATGGTTTCCTTTTACGATGTCCTTCTTCCAATATTGGCCGTGGTTTCTTTGTTATTTTTCAAACTTACCTAG 1191 0.3854 MENAAQQRNIDTLYNLIEQNPRVLEEIDLIPFVETPLHVAARAGHLQFANEIMMLKPSFSWKFNPQGLRPIHLALEHGHATMVLHLIEMDNKLVRAKMRGGLTLLHLASQSGDLNLLSVVLEACPDSINDLTATNETALHFAVKYEKFKAFEFLLRWLRTNTVELEDILNQKDVEGNTTLHIAAIKNDTKAMKLLIEIMRDLHASNLMGQRAFDIINNQEIRKNLVRSEKRVRMFRTGFLLIETIHEWLIRKTGMKEKLSNEIRNMYIVVASLIATTTYQAVLSPPGGFRQVDEGGTNTTLFLAQGTSVMPDEVFMVFSATNLFAFMTSILTIVLLMPKNVGWYLLYPSTMFLAIGYIMSIMVISPNDFTKDLMVSFYDVLLPILAVVSLLFFKLT* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02192 396 PANTHER HOMEOBOX PROTEIN WARIAI 9 364 - -
Phac11g02192 396 Pfam Domain of unknown function 261 341 IPR026961 -
Phac11g02192 396 ProSiteProfiles Ankyrin repeat profile. 175 207 IPR002110 GO:0005515
Phac11g02192 396 Gene3D - 1 228 IPR036770 -
Phac11g02192 396 SMART ANK_2a 66 95 IPR002110 GO:0005515
Phac11g02192 396 SMART ANK_2a 175 204 IPR002110 GO:0005515
Phac11g02192 396 SMART ANK_2a 100 130 IPR002110 GO:0005515
Phac11g02192 396 SMART ANK_2a 134 167 IPR002110 GO:0005515
Phac11g02192 396 SMART ANK_2a 32 61 IPR002110 GO:0005515
Phac11g02192 396 ProSiteProfiles Ankyrin repeat region circular profile. 175 206 - -
Phac11g02192 396 SUPERFAMILY Ankyrin repeat 3 216 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02192 Phac-Chr11 32901535 32903219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02192 1 367 Miscellaneous Gene Families AT5G15500 38.168 1.38e-67 219