Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02188 ATGGCTTCAAACATCAACATAACTATTGATAACAAATTGAGAGAAGCTGCAAGAGATGGAGATATAAACCTTCTCTACACAGTAATTGAGGAGGATCCACATGTTTTGGAACACAAAGATTCAATACCATTTGTTGAGACACCTTTGCATGTTGCTGCATCATTTGGTAATATAGGGTTTGCCACTGAGATCATGAGGCTGAAACCTTCATTTGCTTGGAAGCTAAATCAACAGGGGTTCACACCTATCCACCTTGCTATGCAACACAACCAAAAGAGAATGGTGCTTCGCTTTGTAGGCATCAACAAAGAATTGGTTCGAGCCAAAGGGAGAGAAGGTTTCACTCCTTTGCATTTTGCAACTCAGATTGGAGAAATTGATCTTTTGGCAAAGTTCCTCATGGCTTGTCCAGAATCCATTGAAGATGTGAGTGTTAGATGTGAAACTGCACTTCATATTGCAGTGAGGTTTCAACAATATGAGGCTCTTCAAGTCCTGGTTGGATGGCTGAAGAGAACATGTCAGATGAGTGCCATGCAGATAGAAAAAACAGTGTTGAACTGGAAAGATGAGTCAGGTAACACCATTCTGCATGTTTCAGCCCTCATCAGTGACTCAAAGGCGCTTCGATTGTTGACGAAGACTAAAATTGATTTGAAGGCCAAGAATTTGGAAAAATCAACAGCACTAGACATAGCAGGTAGTGCAGAGATAAAGAACGTCTTAGTGAGGGCTGGTGCAAAACATGGTTCATCAGTTACTGATTCTCCAACCATTGCGGAAAACCAAAAGTTGAATATGACAGTTGCAGAGAAAATAATGATATTTGTAATTCGTATCAGAAGAGATATAACAGAAGACCAACGCCAAGCTTTTCTTATAGTTGCTGCTCTCATTGCAACTGCTACCTATCAATCAGCACTAAGCCCCCCAGGTGGAGTTTATCAGGCTAATTTAGAGGATAATATCAGTAATGTTAGCATCAGTTCCACCAGTTCTAGAACTTCTGGTGGTACCCAAAGGAATGCTGGAACTTCTGTCATGTCTGAAGGTGATTTCATGACCTTATCCATTATGAATTCACTTTCTCTTTTGGTTTCAACAGTGGCAATCTGTATTTTGACGCCAAGTGGGATAGTGGGTGGTGTATTGTTAACGCCATTGATTTGGTTTGCCTACTGCTATCTGTATTCTATGAAGGTGATAGCCCCCACTAATGCTACCTCAATTGTGAATTTGGTTATGGTGTGTTTATTCCCCTCCTTGCACTCAGGAGTGTGCTGGGCGTTTTCTTCAGTGTATCGGAGACTTAAGTGTCGTGAAGAGAACAGGGAAATTGAAACAAGGAATGGTGCAACAGGAAGAAACATATGGTAG 1377 0.4118 MASNINITIDNKLREAARDGDINLLYTVIEEDPHVLEHKDSIPFVETPLHVAASFGNIGFATEIMRLKPSFAWKLNQQGFTPIHLAMQHNQKRMVLRFVGINKELVRAKGREGFTPLHFATQIGEIDLLAKFLMACPESIEDVSVRCETALHIAVRFQQYEALQVLVGWLKRTCQMSAMQIEKTVLNWKDESGNTILHVSALISDSKALRLLTKTKIDLKAKNLEKSTALDIAGSAEIKNVLVRAGAKHGSSVTDSPTIAENQKLNMTVAEKIMIFVIRIRRDITEDQRQAFLIVAALIATATYQSALSPPGGVYQANLEDNISNVSISSTSSRTSGGTQRNAGTSVMSEGDFMTLSIMNSLSLLVSTVAICILTPSGIVGGVLLTPLIWFAYCYLYSMKVIAPTNATSIVNLVMVCLFPSLHSGVCWAFSSVYRRLKCREENREIETRNGATGRNIW* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02188 458 Pfam Ankyrin repeats (3 copies) 109 167 IPR002110 GO:0005515
Phac11g02188 458 ProSiteProfiles Ankyrin repeat profile. 112 134 IPR002110 GO:0005515
Phac11g02188 458 PANTHER HOMEOBOX PROTEIN WARIAI 18 412 - -
Phac11g02188 458 ProSiteProfiles Ankyrin repeat region circular profile. 112 134 - -
Phac11g02188 458 SMART ANK_2a 78 107 IPR002110 GO:0005515
Phac11g02188 458 SMART ANK_2a 146 176 IPR002110 GO:0005515
Phac11g02188 458 SMART ANK_2a 44 73 IPR002110 GO:0005515
Phac11g02188 458 SMART ANK_2a 112 142 IPR002110 GO:0005515
Phac11g02188 458 SMART ANK_2a 192 221 IPR002110 GO:0005515
Phac11g02188 458 SUPERFAMILY Ankyrin repeat 13 246 IPR036770 -
Phac11g02188 458 Pfam Domain of unknown function 285 377 IPR026961 -
Phac11g02188 458 Gene3D - 6 245 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02188 Phac-Chr11 32792591 32795253 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02188 9 318 Miscellaneous Gene Families AT4G10720 43.711 1.92e-88 274