Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3822 ATGGTGGGGAAGGATCAATCACCAAAGGAAAGGAATAGAGATTGGATTAGAGCTCTTATGAATAGTAGCTCTGGCTATTGTGATGATCATCGTGATCTTCGATCTAATGAGAAGAATACTTTCTGTGTAGATTGTGCTGTTAGATTCTGTAGGCACTGTAAGGAAGCTCATTCCATTCATAGAAGGTTTCAGATTTACCGATATTCCTATCAGGATGTTTTCCGCCATTCGGAGCTACAGAAGCACTTTGACTGCTCAAATATTCAGACTTACATATCCAATAAAGATAGGATTGTGCATCTCAAACCTCGGCCTCCAATCTATAAGTCTAAATCTGGTGATCAATGCCCTGAATCAAAATCCAAAGAAAGCAACTTATCAGCAAGATTTAAGTCAGGAGGTAGTACATGCGAAGAATGTGGGAAACACTTACAAGATGAGCATAGTCGCTGGTGCTCAATTATATGCAAGATAGGGGAGCCTCAAAGCCAAGGTCCAAATCATCATACAGAAAGGAGTTTAGTTGACTCTTTCAACCAAAGTGGTAGATGCATCATCACTCCAAAAACTGAAGCTATTGACTTTACTATGAGTGATAACCTTAATTCGGAACCAGAGTCATCTATTTCTGAAGCTGAGCCATGTGGGCGGGTTGAAGTTGTGAATTTCAGAAAGCGCCCAAGAAAAACTACTCCTGAGAGGCCTGTCTTTGTTTTCGTTTCTTAG 726 0.405 MVGKDQSPKERNRDWIRALMNSSSGYCDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDCSNIQTYISNKDRIVHLKPRPPIYKSKSGDQCPESKSKESNLSARFKSGGSTCEECGKHLQDEHSRWCSIICKIGEPQSQGPNHHTERSLVDSFNQSGRCIITPKTEAIDFTMSDNLNSEPESSISEAEPCGRVEVVNFRKRPRKTTPERPVFVFVS* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3822 241 MobiDBLite consensus disorder prediction 104 131 - -
Mtr8g3822 241 Pfam PLATZ transcription factor 67 158 IPR006734 -
Mtr8g3822 241 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 234 - -
Mtr8g3822 241 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 234 - -
Mtr8g3822 241 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3822 Mtr-Chr8 48848922 48851109 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mtr8g3822 PLATZ 3.6e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3822 8 48848922 48851109 Mtr8g3822 8 48848922 48851109 ECH