Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3821 ATGTCGGTTCCAGTGGACCATAAAGATCAAGGGGTTGGAGCTGTTCCCCAATCTACAAGTACACCAAATTGGACAATTCATGTCTCAGATATAAAAACGGTTAAGGTAAGCAATGTATCAATGACTGCGACCGAGAAGGATATCAAAGAGTTTTTCTCATTCTCTGGTGACATTCAATATGTTGAGATGCAAAAGGAAACTGAGAGCACTAAGACTGCATATGTTACCTTTAAGAATTCACAGGGAGCAGACACAGCGGTGCTCTTGACGGGTTCCAACATAGCTAATTCTCCCGTCACCATCACGCCATTTGAAAATTATCAGCTGCCCCCTGAAGCTCAACCATTTAGTCCTAACCAAAAGCAGACTCCTGCTGCTGTTAAGAAGGCTGAAGATGCTGTGAGCACCATGCTTGCCAAAGGTTTTGTTTTAGGAAAAGGTGCAATTAATAGAGCCAAATCCTTTGACGAACGCCATCACTTGATTTCAAATGCTTCTGCCACAGTTGCTTCCATCGACCGTAAAATCGGTTTGACTGATAAACTAAGTATTGGAACTGCTATAGTAAATGAAAAAGTGAGAGAGATGGATGAAAAATTTCAGGTTTCTGAAAAAACAAAGTCTGTTTATGCGGTTGCTGAGCAAAAGGCAAGTGATGCTGGATCTGCAATCATGAGCAATCCTTATGTATCAACCGGAGCTTCGTGGGTGTCGAGTGCAATTACTGTTGTTGCAAAAGCAGCTGAAGATGTAACCACAATGACCATGGAGAAGGTTGAAATGGCCGAGGTTGATAAGAAAGAGATCATTTACAGTGAAAGGAAGGATGTAGTTGATGAATTGTCACATATACACTCTGAGAAACCTTCAGTTGGAAATACTTCTCCAAAAGATCCTGTTAAATCAAGTGATGATAGTAGGTTTGGGATTATATGA 936 0.4113 MSVPVDHKDQGVGAVPQSTSTPNWTIHVSDIKTVKVSNVSMTATEKDIKEFFSFSGDIQYVEMQKETESTKTAYVTFKNSQGADTAVLLTGSNIANSPVTITPFENYQLPPEAQPFSPNQKQTPAAVKKAEDAVSTMLAKGFVLGKGAINRAKSFDERHHLISNASATVASIDRKIGLTDKLSIGTAIVNEKVREMDEKFQVSEKTKSVYAVAEQKASDAGSAIMSNPYVSTGASWVSSAITVVAKAAEDVTTMTMEKVEMAEVDKKEIIYSERKDVVDELSHIHSEKPSVGNTSPKDPVKSSDDSRFGII* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3821 311 SMART rrm1_1 33 102 IPR000504 GO:0003723
Mtr8g3821 311 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 8 309 - -
Mtr8g3821 311 SUPERFAMILY RNA-binding domain, RBD 22 107 IPR035979 GO:0003676
Mtr8g3821 311 MobiDBLite consensus disorder prediction 281 311 - -
Mtr8g3821 311 Gene3D - 28 102 IPR012677 -
Mtr8g3821 311 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Mtr8g3821 311 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 98 IPR000504 GO:0003723
Mtr8g3821 311 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 8 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3821 Mtr-Chr8 48840958 48843624 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3821 8 48840958 48843624 Mtr8g3821 8 48840958 48843624 ECH